Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-5A0A075B604 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Gm4995-201ENSMUST00000117247 432 ntBASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Gm27702-201ENSMUST00000184512 56 ntBASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav7n-5A0A075B604 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7n-5A0A075B604 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7n-5A0A075B604 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Gm14822-201ENSMUST00000122247 291 ntBASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Gm18057-201ENSMUST00000208220 503 ntBASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-5A0A075B604 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-5A0A075B604 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms