Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox6P40645 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox6P40645 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox6P40645 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox6P40645 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Sox6P40645 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Gm11452-201ENSMUST00000122376 690 ntBASIC13.97□□□□□ -0.17
Sox6P40645 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.97□□□□□ -0.17
Sox6P40645 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.97□□□□□ -0.17
Sox6P40645 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox6P40645 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sox6P40645 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox6P40645 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox6P40645 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sox6P40645 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sox6P40645 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox6P40645 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Sox6P40645 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox6P40645 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox6P40645 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.96□□□□□ -0.17
Sox6P40645 Gm6296-201ENSMUST00000222599 943 ntBASIC13.96□□□□□ -0.17
Sox6P40645 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sox6P40645 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox6P40645 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sox6P40645 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox6P40645 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Sox6P40645 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sox6P40645 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox6P40645 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Sox6P40645 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox6P40645 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Sox6P40645 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox6P40645 Gm13418-201ENSMUST00000119097 944 ntBASIC13.95□□□□□ -0.18
Sox6P40645 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.95□□□□□ -0.18
Sox6P40645 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox6P40645 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.95□□□□□ -0.18
Sox6P40645 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox6P40645 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox6P40645 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms