Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hcn1O88704 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Hcn1O88704 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.25□□□□□ -0.13
Hcn1O88704 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.25□□□□□ -0.13
Hcn1O88704 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.25□□□□□ -0.13
Hcn1O88704 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.25□□□□□ -0.13
Hcn1O88704 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.25□□□□□ -0.13
Hcn1O88704 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.25□□□□□ -0.13
Hcn1O88704 Psmb5-202ENSMUST00000227257 622 ntBASIC14.25□□□□□ -0.13
Hcn1O88704 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hcn1O88704 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hcn1O88704 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hcn1O88704 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hcn1O88704 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Hcn1O88704 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn1O88704 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hcn1O88704 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Hcn1O88704 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hcn1O88704 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.24□□□□□ -0.13
Hcn1O88704 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.24□□□□□ -0.13
Hcn1O88704 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.24□□□□□ -0.13
Hcn1O88704 Gm5364-201ENSMUST00000216789 889 ntBASIC14.24□□□□□ -0.13
Hcn1O88704 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.24□□□□□ -0.13
Hcn1O88704 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.24□□□□□ -0.13
Hcn1O88704 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.24□□□□□ -0.13
Hcn1O88704 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.24□□□□□ -0.13
Hcn1O88704 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hcn1O88704 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn1O88704 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.23□□□□□ -0.13
Hcn1O88704 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Hcn1O88704 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Hcn1O88704 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.23□□□□□ -0.13
Hcn1O88704 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Gm18489-201ENSMUST00000172565 551 ntBASIC14.23□□□□□ -0.13
Hcn1O88704 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.23□□□□□ -0.13
Hcn1O88704 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.23□□□□□ -0.13
Hcn1O88704 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.23□□□□□ -0.13
Hcn1O88704 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hcn1O88704 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.23□□□□□ -0.13
Hcn1O88704 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.23□□□□□ -0.13
Hcn1O88704 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms