Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Copb2O55029 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Copb2O55029 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Copb2O55029 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 BC037039-201ENSMUST00000192003 2205 ntBASIC17.06■□□□□ 0.32
Copb2O55029 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Copb2O55029 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Copb2O55029 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Copb2O55029 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.06■□□□□ 0.32
Copb2O55029 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.06■□□□□ 0.32
Copb2O55029 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.06■□□□□ 0.32
Copb2O55029 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Copb2O55029 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.06■□□□□ 0.32
Copb2O55029 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Copb2O55029 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Copb2O55029 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Copb2O55029 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Copb2O55029 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.05■□□□□ 0.32
Copb2O55029 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.05■□□□□ 0.32
Copb2O55029 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Copb2O55029 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.05■□□□□ 0.32
Copb2O55029 Gm18737-201ENSMUST00000173594 937 ntBASIC17.05■□□□□ 0.32
Copb2O55029 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.05■□□□□ 0.32
Copb2O55029 Gm38294-201ENSMUST00000192831 381 ntBASIC17.05■□□□□ 0.32
Copb2O55029 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Copb2O55029 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Copb2O55029 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Copb2O55029 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.04■□□□□ 0.32
Copb2O55029 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.04■□□□□ 0.32
Copb2O55029 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Copb2O55029 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Copb2O55029 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.04■□□□□ 0.32
Copb2O55029 Gm6415-201ENSMUST00000118488 348 ntBASIC17.04■□□□□ 0.32
Copb2O55029 Gm13015-201ENSMUST00000118674 204 ntBASIC17.04■□□□□ 0.32
Copb2O55029 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Copb2O55029 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Copb2O55029 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Copb2O55029 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Gm7063-201ENSMUST00000186840 981 ntBASIC17.04■□□□□ 0.32
Copb2O55029 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.04■□□□□ 0.32
Copb2O55029 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Copb2O55029 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Copb2O55029 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.04■□□□□ 0.32
Copb2O55029 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.04■□□□□ 0.32
Copb2O55029 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Copb2O55029 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Copb2O55029 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Copb2O55029 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Copb2O55029 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Copb2O55029 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Copb2O55029 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Copb2O55029 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Copb2O55029 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Copb2O55029 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Copb2O55029 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Copb2O55029 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.03■□□□□ 0.32
Copb2O55029 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Copb2O55029 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms