Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Gm18666-201ENSMUST00000190039 958 ntBASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx6-2D3Z4R4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx6-2D3Z4R4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx6-2D3Z4R4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx6-2D3Z4R4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Grk6-205ENSMUST00000224653 2976 ntBASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Il3ra-202ENSMUST00000223589 738 ntBASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-2D3Z4R4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx6-2D3Z4R4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms