Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-1A0A0G2JEV5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-1A0A0G2JEV5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-1A0A0G2JEV5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-1A0A0G2JEV5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav7-1A0A0G2JEV5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm43767-201ENSMUST00000198933 381 ntBASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-1A0A0G2JEV5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm6296-201ENSMUST00000222599 943 ntBASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms