Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Gm10499-201ENSMUST00000174094 934 ntBASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Gm23634-201ENSMUST00000175071 91 ntBASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trdv1A0A075B657 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Gm10252-201ENSMUST00000209541 832 ntBASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trdv1A0A075B657 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Gm8097-201ENSMUST00000117903 829 ntBASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Gm15372-201ENSMUST00000120729 834 ntBASIC11.31□□□□□ -0.6
Trdv1A0A075B657 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms