Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ap3s1Q9DCR2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ap3s1Q9DCR2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ap3s1Q9DCR2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ap3s1Q9DCR2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ap3s1Q9DCR2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ap3s1Q9DCR2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ap3s1Q9DCR2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ap3s1Q9DCR2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ap3s1Q9DCR2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ap3s1Q9DCR2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ap3s1Q9DCR2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.91■□□□□ 0.78
Ap3s1Q9DCR2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ap3s1Q9DCR2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ap3s1Q9DCR2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ap3s1Q9DCR2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ap3s1Q9DCR2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ap3s1Q9DCR2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ap3s1Q9DCR2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ap3s1Q9DCR2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ap3s1Q9DCR2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ap3s1Q9DCR2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ap3s1Q9DCR2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ap3s1Q9DCR2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ap3s1Q9DCR2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.88■□□□□ 0.77
Ap3s1Q9DCR2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.87■□□□□ 0.77
Ap3s1Q9DCR2 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.87■□□□□ 0.77
Ap3s1Q9DCR2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ap3s1Q9DCR2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.87■□□□□ 0.77
Ap3s1Q9DCR2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ap3s1Q9DCR2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ap3s1Q9DCR2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ap3s1Q9DCR2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ap3s1Q9DCR2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ap3s1Q9DCR2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ap3s1Q9DCR2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ap3s1Q9DCR2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ap3s1Q9DCR2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ap3s1Q9DCR2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.85■□□□□ 0.77
Ap3s1Q9DCR2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ap3s1Q9DCR2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ap3s1Q9DCR2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ap3s1Q9DCR2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ap3s1Q9DCR2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ap3s1Q9DCR2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ap3s1Q9DCR2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ap3s1Q9DCR2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ap3s1Q9DCR2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ap3s1Q9DCR2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ap3s1Q9DCR2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ap3s1Q9DCR2 Gm30023-201ENSMUST00000197970 889 ntBASIC19.83■□□□□ 0.77
Ap3s1Q9DCR2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ap3s1Q9DCR2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ap3s1Q9DCR2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ap3s1Q9DCR2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ap3s1Q9DCR2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ap3s1Q9DCR2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.82■□□□□ 0.76
Ap3s1Q9DCR2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ap3s1Q9DCR2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ap3s1Q9DCR2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ap3s1Q9DCR2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ap3s1Q9DCR2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ap3s1Q9DCR2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ap3s1Q9DCR2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ap3s1Q9DCR2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ap3s1Q9DCR2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ap3s1Q9DCR2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ap3s1Q9DCR2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ap3s1Q9DCR2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ap3s1Q9DCR2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.8■□□□□ 0.76
Ap3s1Q9DCR2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ap3s1Q9DCR2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ap3s1Q9DCR2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ap3s1Q9DCR2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ap3s1Q9DCR2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Ap3s1Q9DCR2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.79■□□□□ 0.76
Ap3s1Q9DCR2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ap3s1Q9DCR2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ap3s1Q9DCR2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ap3s1Q9DCR2 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.78■□□□□ 0.76
Ap3s1Q9DCR2 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.78■□□□□ 0.76
Ap3s1Q9DCR2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ap3s1Q9DCR2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ap3s1Q9DCR2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Ap3s1Q9DCR2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ap3s1Q9DCR2 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.77■□□□□ 0.76
Ap3s1Q9DCR2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ap3s1Q9DCR2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ap3s1Q9DCR2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ap3s1Q9DCR2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ap3s1Q9DCR2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ap3s1Q9DCR2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Ap3s1Q9DCR2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ap3s1Q9DCR2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ap3s1Q9DCR2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.76■□□□□ 0.75
Ap3s1Q9DCR2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ap3s1Q9DCR2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ap3s1Q9DCR2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ap3s1Q9DCR2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ap3s1Q9DCR2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms