Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3l1Q9D9H3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3l1Q9D9H3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mbd3l1Q9D9H3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3l1Q9D9H3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3l1Q9D9H3 Gm25238-201ENSMUST00000174914 89 ntBASIC19.44■□□□□ 0.7
Mbd3l1Q9D9H3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Mbd3l1Q9D9H3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mbd3l1Q9D9H3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3l1Q9D9H3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3l1Q9D9H3 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.43■□□□□ 0.7
Mbd3l1Q9D9H3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mbd3l1Q9D9H3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.43■□□□□ 0.7
Mbd3l1Q9D9H3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3l1Q9D9H3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3l1Q9D9H3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3l1Q9D9H3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3l1Q9D9H3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mbd3l1Q9D9H3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.42■□□□□ 0.7
Mbd3l1Q9D9H3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Mbd3l1Q9D9H3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mbd3l1Q9D9H3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mbd3l1Q9D9H3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mbd3l1Q9D9H3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mbd3l1Q9D9H3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.4■□□□□ 0.7
Mbd3l1Q9D9H3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.4■□□□□ 0.7
Mbd3l1Q9D9H3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mbd3l1Q9D9H3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.39■□□□□ 0.69
Mbd3l1Q9D9H3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.39■□□□□ 0.69
Mbd3l1Q9D9H3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mbd3l1Q9D9H3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mbd3l1Q9D9H3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mbd3l1Q9D9H3 Gm25262-201ENSMUST00000174934 133 ntBASIC19.38■□□□□ 0.69
Mbd3l1Q9D9H3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.38■□□□□ 0.69
Mbd3l1Q9D9H3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mbd3l1Q9D9H3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Mbd3l1Q9D9H3 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.37■□□□□ 0.69
Mbd3l1Q9D9H3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.37■□□□□ 0.69
Mbd3l1Q9D9H3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Mbd3l1Q9D9H3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mbd3l1Q9D9H3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mbd3l1Q9D9H3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Mbd3l1Q9D9H3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mbd3l1Q9D9H3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mbd3l1Q9D9H3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mbd3l1Q9D9H3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mbd3l1Q9D9H3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mbd3l1Q9D9H3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Mbd3l1Q9D9H3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mbd3l1Q9D9H3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mbd3l1Q9D9H3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mbd3l1Q9D9H3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mbd3l1Q9D9H3 Particl-201ENSMUST00000205370 1560 ntBASIC19.35■□□□□ 0.69
Mbd3l1Q9D9H3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mbd3l1Q9D9H3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mbd3l1Q9D9H3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Mbd3l1Q9D9H3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mbd3l1Q9D9H3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Mbd3l1Q9D9H3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Mbd3l1Q9D9H3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mbd3l1Q9D9H3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.34■□□□□ 0.69
Mbd3l1Q9D9H3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mbd3l1Q9D9H3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mbd3l1Q9D9H3 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.33■□□□□ 0.68
Mbd3l1Q9D9H3 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.33■□□□□ 0.68
Mbd3l1Q9D9H3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mbd3l1Q9D9H3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mbd3l1Q9D9H3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.32■□□□□ 0.68
Mbd3l1Q9D9H3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mbd3l1Q9D9H3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mbd3l1Q9D9H3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mbd3l1Q9D9H3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mbd3l1Q9D9H3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Mbd3l1Q9D9H3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mbd3l1Q9D9H3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mbd3l1Q9D9H3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.3■□□□□ 0.68
Mbd3l1Q9D9H3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mbd3l1Q9D9H3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mbd3l1Q9D9H3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mbd3l1Q9D9H3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mbd3l1Q9D9H3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mbd3l1Q9D9H3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Mbd3l1Q9D9H3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mbd3l1Q9D9H3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mbd3l1Q9D9H3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mbd3l1Q9D9H3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mbd3l1Q9D9H3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.28■□□□□ 0.68
Mbd3l1Q9D9H3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Mbd3l1Q9D9H3 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.28■□□□□ 0.68
Mbd3l1Q9D9H3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Mbd3l1Q9D9H3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mbd3l1Q9D9H3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mbd3l1Q9D9H3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mbd3l1Q9D9H3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mbd3l1Q9D9H3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mbd3l1Q9D9H3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Mbd3l1Q9D9H3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mbd3l1Q9D9H3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Mbd3l1Q9D9H3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mbd3l1Q9D9H3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms