Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Lrrc40Q9CRC8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lrrc40Q9CRC8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lrrc40Q9CRC8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrc40Q9CRC8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrc40Q9CRC8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Lrrc40Q9CRC8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrc40Q9CRC8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Lrrc40Q9CRC8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrc40Q9CRC8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrc40Q9CRC8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrc40Q9CRC8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrc40Q9CRC8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrc40Q9CRC8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Lrrc40Q9CRC8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.11■■□□□ 1.13
Lrrc40Q9CRC8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrc40Q9CRC8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrc40Q9CRC8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lrrc40Q9CRC8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Lrrc40Q9CRC8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.1■■□□□ 1.13
Lrrc40Q9CRC8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lrrc40Q9CRC8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lrrc40Q9CRC8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Lrrc40Q9CRC8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrc40Q9CRC8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrc40Q9CRC8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrc40Q9CRC8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrc40Q9CRC8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrc40Q9CRC8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Lrrc40Q9CRC8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.09■■□□□ 1.13
Lrrc40Q9CRC8 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.08■■□□□ 1.13
Lrrc40Q9CRC8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lrrc40Q9CRC8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lrrc40Q9CRC8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lrrc40Q9CRC8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Lrrc40Q9CRC8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lrrc40Q9CRC8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrrc40Q9CRC8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrrc40Q9CRC8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Lrrc40Q9CRC8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.06■■□□□ 1.12
Lrrc40Q9CRC8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrrc40Q9CRC8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Lrrc40Q9CRC8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.05■■□□□ 1.12
Lrrc40Q9CRC8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Lrrc40Q9CRC8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.05■■□□□ 1.12
Lrrc40Q9CRC8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Lrrc40Q9CRC8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.04■■□□□ 1.12
Lrrc40Q9CRC8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.04■■□□□ 1.12
Lrrc40Q9CRC8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.04■■□□□ 1.12
Lrrc40Q9CRC8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Lrrc40Q9CRC8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Lrrc40Q9CRC8 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.03■■□□□ 1.12
Lrrc40Q9CRC8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.03■■□□□ 1.12
Lrrc40Q9CRC8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrrc40Q9CRC8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
Lrrc40Q9CRC8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
Lrrc40Q9CRC8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrrc40Q9CRC8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.02■■□□□ 1.12
Lrrc40Q9CRC8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.02■■□□□ 1.12
Lrrc40Q9CRC8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrrc40Q9CRC8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrrc40Q9CRC8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.02■■□□□ 1.12
Lrrc40Q9CRC8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrrc40Q9CRC8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrrc40Q9CRC8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.01■■□□□ 1.11
Lrrc40Q9CRC8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Lrrc40Q9CRC8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrrc40Q9CRC8 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.01■■□□□ 1.11
Lrrc40Q9CRC8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.01■■□□□ 1.11
Lrrc40Q9CRC8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrrc40Q9CRC8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lrrc40Q9CRC8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Lrrc40Q9CRC8 Gm6311-201ENSMUST00000073790 878 ntBASIC22■■□□□ 1.11
Lrrc40Q9CRC8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lrrc40Q9CRC8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lrrc40Q9CRC8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lrrc40Q9CRC8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Lrrc40Q9CRC8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lrrc40Q9CRC8 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.99■■□□□ 1.11
Lrrc40Q9CRC8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.98■■□□□ 1.11
Lrrc40Q9CRC8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lrrc40Q9CRC8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lrrc40Q9CRC8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lrrc40Q9CRC8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lrrc40Q9CRC8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lrrc40Q9CRC8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lrrc40Q9CRC8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Lrrc40Q9CRC8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lrrc40Q9CRC8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Lrrc40Q9CRC8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lrrc40Q9CRC8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Lrrc40Q9CRC8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lrrc40Q9CRC8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lrrc40Q9CRC8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lrrc40Q9CRC8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lrrc40Q9CRC8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lrrc40Q9CRC8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lrrc40Q9CRC8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.95■■□□□ 1.1
Lrrc40Q9CRC8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Lrrc40Q9CRC8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms