Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC11.96□□□□□ -0.49
Sec61bQ9CQS8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61bQ9CQS8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61bQ9CQS8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC11.96□□□□□ -0.49
Sec61bQ9CQS8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61bQ9CQS8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 Gm6206-201ENSMUST00000133472 2199 ntBASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61bQ9CQS8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Gm43592-201ENSMUST00000196922 1165 ntBASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Sec61bQ9CQS8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61bQ9CQS8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61bQ9CQS8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61bQ9CQS8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61bQ9CQS8 Gm5522-201ENSMUST00000189483 1242 ntBASIC11.93□□□□□ -0.5
Sec61bQ9CQS8 Nsd1-203ENSMUST00000224156 1149 ntBASIC11.93□□□□□ -0.5
Sec61bQ9CQS8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61bQ9CQS8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sec61bQ9CQS8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61bQ9CQS8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sec61bQ9CQS8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Sec61bQ9CQS8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61bQ9CQS8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61bQ9CQS8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61bQ9CQS8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sec61bQ9CQS8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61bQ9CQS8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 Gm22567-201ENSMUST00000175542 342 ntBASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 Gm43566-201ENSMUST00000196851 808 ntBASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 Gm15820-201ENSMUST00000201566 728 ntBASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 Gm45444-201ENSMUST00000211394 898 ntBASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61bQ9CQS8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sec61bQ9CQS8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61bQ9CQS8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC11.89□□□□□ -0.51
Sec61bQ9CQS8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC11.89□□□□□ -0.51
Sec61bQ9CQS8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC11.89□□□□□ -0.51
Sec61bQ9CQS8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC11.89□□□□□ -0.51
Sec61bQ9CQS8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC11.89□□□□□ -0.51
Sec61bQ9CQS8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61bQ9CQS8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61bQ9CQS8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61bQ9CQS8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Sec61bQ9CQS8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61bQ9CQS8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC11.88□□□□□ -0.51
Sec61bQ9CQS8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC11.88□□□□□ -0.51
Sec61bQ9CQS8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61bQ9CQS8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sec61bQ9CQS8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61bQ9CQS8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC11.87□□□□□ -0.51
Sec61bQ9CQS8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC11.87□□□□□ -0.51
Sec61bQ9CQS8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61bQ9CQS8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC11.86□□□□□ -0.51
Sec61bQ9CQS8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61bQ9CQS8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sec61bQ9CQS8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC11.86□□□□□ -0.51
Sec61bQ9CQS8 Rps24-207ENSMUST00000224568 714 ntBASIC11.86□□□□□ -0.51
Sec61bQ9CQS8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sec61bQ9CQS8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sec61bQ9CQS8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61bQ9CQS8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61bQ9CQS8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61bQ9CQS8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Sec61bQ9CQS8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms