Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp1b1Q99LU0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Chmp1b1Q99LU0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp1b1Q99LU0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp1b1Q99LU0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Chmp1b1Q99LU0 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.83■□□□□ 0.93
Chmp1b1Q99LU0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp1b1Q99LU0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp1b1Q99LU0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp1b1Q99LU0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp1b1Q99LU0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp1b1Q99LU0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp1b1Q99LU0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp1b1Q99LU0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.82■□□□□ 0.92
Chmp1b1Q99LU0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp1b1Q99LU0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp1b1Q99LU0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp1b1Q99LU0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp1b1Q99LU0 Gm9812-201ENSMUST00000061934 968 ntBASIC20.81■□□□□ 0.92
Chmp1b1Q99LU0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp1b1Q99LU0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp1b1Q99LU0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp1b1Q99LU0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp1b1Q99LU0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Chmp1b1Q99LU0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Chmp1b1Q99LU0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp1b1Q99LU0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp1b1Q99LU0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp1b1Q99LU0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.8■□□□□ 0.92
Chmp1b1Q99LU0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp1b1Q99LU0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chmp1b1Q99LU0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chmp1b1Q99LU0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.79■□□□□ 0.92
Chmp1b1Q99LU0 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.79■□□□□ 0.92
Chmp1b1Q99LU0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp1b1Q99LU0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.78■□□□□ 0.92
Chmp1b1Q99LU0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.78■□□□□ 0.92
Chmp1b1Q99LU0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Chmp1b1Q99LU0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp1b1Q99LU0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp1b1Q99LU0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Chmp1b1Q99LU0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp1b1Q99LU0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp1b1Q99LU0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chmp1b1Q99LU0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp1b1Q99LU0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp1b1Q99LU0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp1b1Q99LU0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Chmp1b1Q99LU0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.76■□□□□ 0.91
Chmp1b1Q99LU0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp1b1Q99LU0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp1b1Q99LU0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp1b1Q99LU0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp1b1Q99LU0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Chmp1b1Q99LU0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp1b1Q99LU0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp1b1Q99LU0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp1b1Q99LU0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Chmp1b1Q99LU0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp1b1Q99LU0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp1b1Q99LU0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp1b1Q99LU0 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.74■□□□□ 0.91
Chmp1b1Q99LU0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.74■□□□□ 0.91
Chmp1b1Q99LU0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp1b1Q99LU0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp1b1Q99LU0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp1b1Q99LU0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp1b1Q99LU0 Terc-201ENSMUST00000082862 423 ntBASIC20.73■□□□□ 0.91
Chmp1b1Q99LU0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Chmp1b1Q99LU0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp1b1Q99LU0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp1b1Q99LU0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp1b1Q99LU0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Chmp1b1Q99LU0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp1b1Q99LU0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp1b1Q99LU0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp1b1Q99LU0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp1b1Q99LU0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp1b1Q99LU0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp1b1Q99LU0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chmp1b1Q99LU0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp1b1Q99LU0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp1b1Q99LU0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.71■□□□□ 0.91
Chmp1b1Q99LU0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp1b1Q99LU0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp1b1Q99LU0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp1b1Q99LU0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp1b1Q99LU0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp1b1Q99LU0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Chmp1b1Q99LU0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp1b1Q99LU0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Chmp1b1Q99LU0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp1b1Q99LU0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp1b1Q99LU0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chmp1b1Q99LU0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp1b1Q99LU0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp1b1Q99LU0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.69■□□□□ 0.9
Chmp1b1Q99LU0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Chmp1b1Q99LU0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp1b1Q99LU0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 187.4 ms