Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rfc4Q99J62 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Rfc4Q99J62 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rfc4Q99J62 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Rfc4Q99J62 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
Rfc4Q99J62 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rfc4Q99J62 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Rfc4Q99J62 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rfc4Q99J62 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rfc4Q99J62 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Rfc4Q99J62 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rfc4Q99J62 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rfc4Q99J62 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rfc4Q99J62 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rfc4Q99J62 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Rfc4Q99J62 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
Rfc4Q99J62 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rfc4Q99J62 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Rfc4Q99J62 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rfc4Q99J62 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Rfc4Q99J62 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rfc4Q99J62 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rfc4Q99J62 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rfc4Q99J62 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.96■■□□□ 1.75
Rfc4Q99J62 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.96■■□□□ 1.75
Rfc4Q99J62 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rfc4Q99J62 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rfc4Q99J62 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Rfc4Q99J62 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rfc4Q99J62 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Rfc4Q99J62 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rfc4Q99J62 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.94■■□□□ 1.74
Rfc4Q99J62 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rfc4Q99J62 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Rfc4Q99J62 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Rfc4Q99J62 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rfc4Q99J62 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rfc4Q99J62 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rfc4Q99J62 Gm9959-201ENSMUST00000068277 390 ntBASIC25.93■■□□□ 1.74
Rfc4Q99J62 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Rfc4Q99J62 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rfc4Q99J62 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rfc4Q99J62 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.91■■□□□ 1.74
Rfc4Q99J62 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.91■■□□□ 1.74
Rfc4Q99J62 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rfc4Q99J62 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rfc4Q99J62 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC25.9■■□□□ 1.74
Rfc4Q99J62 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Rfc4Q99J62 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rfc4Q99J62 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Rfc4Q99J62 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rfc4Q99J62 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.89■■□□□ 1.74
Rfc4Q99J62 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rfc4Q99J62 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rfc4Q99J62 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Rfc4Q99J62 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Rfc4Q99J62 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Rfc4Q99J62 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Rfc4Q99J62 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rfc4Q99J62 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Rfc4Q99J62 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rfc4Q99J62 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rfc4Q99J62 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Rfc4Q99J62 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rfc4Q99J62 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Rfc4Q99J62 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Rfc4Q99J62 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rfc4Q99J62 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rfc4Q99J62 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
Rfc4Q99J62 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Rfc4Q99J62 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.84■■□□□ 1.73
Rfc4Q99J62 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Rfc4Q99J62 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC25.84■■□□□ 1.73
Rfc4Q99J62 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Rfc4Q99J62 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Rfc4Q99J62 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.84■■□□□ 1.73
Rfc4Q99J62 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Rfc4Q99J62 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rfc4Q99J62 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rfc4Q99J62 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Rfc4Q99J62 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rfc4Q99J62 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rfc4Q99J62 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Rfc4Q99J62 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.82■■□□□ 1.72
Rfc4Q99J62 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.82■■□□□ 1.72
Rfc4Q99J62 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rfc4Q99J62 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rfc4Q99J62 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rfc4Q99J62 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rfc4Q99J62 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.8■■□□□ 1.72
Rfc4Q99J62 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Rfc4Q99J62 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rfc4Q99J62 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rfc4Q99J62 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rfc4Q99J62 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.79■■□□□ 1.72
Rfc4Q99J62 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC25.79■■□□□ 1.72
Rfc4Q99J62 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rfc4Q99J62 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Rfc4Q99J62 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rfc4Q99J62 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms