Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb18Q91Y02 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb18Q91Y02 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb18Q91Y02 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb18Q91Y02 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb18Q91Y02 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Pcdhb18Q91Y02 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb18Q91Y02 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb18Q91Y02 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb18Q91Y02 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Pcdhb18Q91Y02 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.34■■□□□ 1.33
Pcdhb18Q91Y02 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb18Q91Y02 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb18Q91Y02 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb18Q91Y02 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb18Q91Y02 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
Pcdhb18Q91Y02 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb18Q91Y02 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.32■■□□□ 1.32
Pcdhb18Q91Y02 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.32■■□□□ 1.32
Pcdhb18Q91Y02 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb18Q91Y02 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb18Q91Y02 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb18Q91Y02 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb18Q91Y02 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb18Q91Y02 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb18Q91Y02 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Pcdhb18Q91Y02 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb18Q91Y02 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb18Q91Y02 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.3■■□□□ 1.32
Pcdhb18Q91Y02 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb18Q91Y02 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb18Q91Y02 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.3■■□□□ 1.32
Pcdhb18Q91Y02 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb18Q91Y02 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb18Q91Y02 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.29■■□□□ 1.32
Pcdhb18Q91Y02 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb18Q91Y02 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb18Q91Y02 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb18Q91Y02 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
Pcdhb18Q91Y02 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb18Q91Y02 Gm43566-201ENSMUST00000196851 808 ntBASIC23.28■■□□□ 1.32
Pcdhb18Q91Y02 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb18Q91Y02 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb18Q91Y02 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb18Q91Y02 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb18Q91Y02 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb18Q91Y02 Gm13238-201ENSMUST00000117655 780 ntBASIC23.27■■□□□ 1.32
Pcdhb18Q91Y02 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb18Q91Y02 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb18Q91Y02 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb18Q91Y02 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb18Q91Y02 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb18Q91Y02 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb18Q91Y02 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb18Q91Y02 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb18Q91Y02 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb18Q91Y02 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.25■■□□□ 1.31
Pcdhb18Q91Y02 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb18Q91Y02 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb18Q91Y02 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb18Q91Y02 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb18Q91Y02 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.24■■□□□ 1.31
Pcdhb18Q91Y02 Gm15820-201ENSMUST00000201566 728 ntBASIC23.24■■□□□ 1.31
Pcdhb18Q91Y02 Gm45444-201ENSMUST00000211394 898 ntBASIC23.24■■□□□ 1.31
Pcdhb18Q91Y02 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb18Q91Y02 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb18Q91Y02 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb18Q91Y02 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb18Q91Y02 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb18Q91Y02 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb18Q91Y02 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb18Q91Y02 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb18Q91Y02 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.22■■□□□ 1.31
Pcdhb18Q91Y02 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Pcdhb18Q91Y02 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb18Q91Y02 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb18Q91Y02 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.21■■□□□ 1.31
Pcdhb18Q91Y02 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Pcdhb18Q91Y02 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb18Q91Y02 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb18Q91Y02 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb18Q91Y02 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb18Q91Y02 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb18Q91Y02 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.2■■□□□ 1.3
Pcdhb18Q91Y02 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.2■■□□□ 1.3
Pcdhb18Q91Y02 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Pcdhb18Q91Y02 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb18Q91Y02 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.19■■□□□ 1.3
Pcdhb18Q91Y02 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.19■■□□□ 1.3
Pcdhb18Q91Y02 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.19■■□□□ 1.3
Pcdhb18Q91Y02 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb18Q91Y02 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Pcdhb18Q91Y02 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.18■■□□□ 1.3
Pcdhb18Q91Y02 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.18■■□□□ 1.3
Pcdhb18Q91Y02 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.17■■□□□ 1.3
Pcdhb18Q91Y02 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.17■■□□□ 1.3
Pcdhb18Q91Y02 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb18Q91Y02 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb18Q91Y02 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb18Q91Y02 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms