Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb5Q91XX5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pcdhgb5Q91XX5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Pcdhgb5Q91XX5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Pcdhgb5Q91XX5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgb5Q91XX5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgb5Q91XX5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgb5Q91XX5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgb5Q91XX5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.21■■□□□ 1.15
Pcdhgb5Q91XX5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgb5Q91XX5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.21■■□□□ 1.15
Pcdhgb5Q91XX5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.2■■□□□ 1.15
Pcdhgb5Q91XX5 Gm22567-201ENSMUST00000175542 342 ntBASIC22.2■■□□□ 1.14
Pcdhgb5Q91XX5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb5Q91XX5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb5Q91XX5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb5Q91XX5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb5Q91XX5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb5Q91XX5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb5Q91XX5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.19■■□□□ 1.14
Pcdhgb5Q91XX5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.19■■□□□ 1.14
Pcdhgb5Q91XX5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb5Q91XX5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.18■■□□□ 1.14
Pcdhgb5Q91XX5 Gm15820-201ENSMUST00000201566 728 ntBASIC22.18■■□□□ 1.14
Pcdhgb5Q91XX5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb5Q91XX5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb5Q91XX5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb5Q91XX5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.17■■□□□ 1.14
Pcdhgb5Q91XX5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.17■■□□□ 1.14
Pcdhgb5Q91XX5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb5Q91XX5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb5Q91XX5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb5Q91XX5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.16■■□□□ 1.14
Pcdhgb5Q91XX5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.16■■□□□ 1.14
Pcdhgb5Q91XX5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.16■■□□□ 1.14
Pcdhgb5Q91XX5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb5Q91XX5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb5Q91XX5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb5Q91XX5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb5Q91XX5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.15■■□□□ 1.14
Pcdhgb5Q91XX5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhgb5Q91XX5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgb5Q91XX5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgb5Q91XX5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgb5Q91XX5 Gm13238-201ENSMUST00000117655 780 ntBASIC22.13■■□□□ 1.13
Pcdhgb5Q91XX5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb5Q91XX5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb5Q91XX5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb5Q91XX5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb5Q91XX5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgb5Q91XX5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.12■■□□□ 1.13
Pcdhgb5Q91XX5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.11■■□□□ 1.13
Pcdhgb5Q91XX5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgb5Q91XX5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgb5Q91XX5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Pcdhgb5Q91XX5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.11■■□□□ 1.13
Pcdhgb5Q91XX5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgb5Q91XX5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdhgb5Q91XX5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgb5Q91XX5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgb5Q91XX5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgb5Q91XX5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.1■■□□□ 1.13
Pcdhgb5Q91XX5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgb5Q91XX5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Pcdhgb5Q91XX5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.1■■□□□ 1.13
Pcdhgb5Q91XX5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Pcdhgb5Q91XX5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.09■■□□□ 1.13
Pcdhgb5Q91XX5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgb5Q91XX5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgb5Q91XX5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgb5Q91XX5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.09■■□□□ 1.13
Pcdhgb5Q91XX5 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.09■■□□□ 1.13
Pcdhgb5Q91XX5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgb5Q91XX5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.09■■□□□ 1.13
Pcdhgb5Q91XX5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhgb5Q91XX5 Rps24-207ENSMUST00000224568 714 ntBASIC22.08■■□□□ 1.13
Pcdhgb5Q91XX5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgb5Q91XX5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgb5Q91XX5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Pcdhgb5Q91XX5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhgb5Q91XX5 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.08■■□□□ 1.12
Pcdhgb5Q91XX5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb5Q91XX5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.07■■□□□ 1.12
Pcdhgb5Q91XX5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Pcdhgb5Q91XX5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb5Q91XX5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
Pcdhgb5Q91XX5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Pcdhgb5Q91XX5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgb5Q91XX5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgb5Q91XX5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Pcdhgb5Q91XX5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb5Q91XX5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb5Q91XX5 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.05■■□□□ 1.12
Pcdhgb5Q91XX5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.05■■□□□ 1.12
Pcdhgb5Q91XX5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb5Q91XX5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb5Q91XX5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb5Q91XX5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb5Q91XX5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Pcdhgb5Q91XX5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms