Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.44■■□□□ 1.66
Pcdhgc5Q91XW9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhgc5Q91XW9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhgc5Q91XW9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhgc5Q91XW9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhgc5Q91XW9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
Pcdhgc5Q91XW9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.43■■□□□ 1.66
Pcdhgc5Q91XW9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Pcdhgc5Q91XW9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhgc5Q91XW9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhgc5Q91XW9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.42■■□□□ 1.66
Pcdhgc5Q91XW9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Pcdhgc5Q91XW9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Pcdhgc5Q91XW9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Pcdhgc5Q91XW9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhgc5Q91XW9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhgc5Q91XW9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhgc5Q91XW9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.4■■□□□ 1.66
Pcdhgc5Q91XW9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.4■■□□□ 1.66
Pcdhgc5Q91XW9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.4■■□□□ 1.66
Pcdhgc5Q91XW9 Gm13238-201ENSMUST00000117655 780 ntBASIC25.39■■□□□ 1.66
Pcdhgc5Q91XW9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.39■■□□□ 1.66
Pcdhgc5Q91XW9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
Pcdhgc5Q91XW9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pcdhgc5Q91XW9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhgc5Q91XW9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhgc5Q91XW9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Pcdhgc5Q91XW9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhgc5Q91XW9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Pcdhgc5Q91XW9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhgc5Q91XW9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhgc5Q91XW9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.37■■□□□ 1.65
Pcdhgc5Q91XW9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.37■■□□□ 1.65
Pcdhgc5Q91XW9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhgc5Q91XW9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.37■■□□□ 1.65
Pcdhgc5Q91XW9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhgc5Q91XW9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Pcdhgc5Q91XW9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Pcdhgc5Q91XW9 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.34■■□□□ 1.65
Pcdhgc5Q91XW9 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.34■■□□□ 1.65
Pcdhgc5Q91XW9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhgc5Q91XW9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhgc5Q91XW9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.34■■□□□ 1.65
Pcdhgc5Q91XW9 Gm15820-201ENSMUST00000201566 728 ntBASIC25.34■■□□□ 1.65
Pcdhgc5Q91XW9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.34■■□□□ 1.65
Pcdhgc5Q91XW9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhgc5Q91XW9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhgc5Q91XW9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhgc5Q91XW9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhgc5Q91XW9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhgc5Q91XW9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhgc5Q91XW9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhgc5Q91XW9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhgc5Q91XW9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhgc5Q91XW9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhgc5Q91XW9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.33■■□□□ 1.65
Pcdhgc5Q91XW9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhgc5Q91XW9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhgc5Q91XW9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhgc5Q91XW9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhgc5Q91XW9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.32■■□□□ 1.64
Pcdhgc5Q91XW9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhgc5Q91XW9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Pcdhgc5Q91XW9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhgc5Q91XW9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhgc5Q91XW9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhgc5Q91XW9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhgc5Q91XW9 Gm44428-201ENSMUST00000204474 874 ntBASIC25.3■■□□□ 1.64
Pcdhgc5Q91XW9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.3■■□□□ 1.64
Pcdhgc5Q91XW9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
Pcdhgc5Q91XW9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhgc5Q91XW9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhgc5Q91XW9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhgc5Q91XW9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhgc5Q91XW9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhgc5Q91XW9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Pcdhgc5Q91XW9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhgc5Q91XW9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.28■■□□□ 1.64
Pcdhgc5Q91XW9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhgc5Q91XW9 Il17rd-202ENSMUST00000223942 2186 ntBASIC25.28■■□□□ 1.64
Pcdhgc5Q91XW9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhgc5Q91XW9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Pcdhgc5Q91XW9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.27■■□□□ 1.64
Pcdhgc5Q91XW9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
Pcdhgc5Q91XW9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhgc5Q91XW9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhgc5Q91XW9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhgc5Q91XW9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhgc5Q91XW9 Rps24-207ENSMUST00000224568 714 ntBASIC25.26■■□□□ 1.63
Pcdhgc5Q91XW9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Pcdhgc5Q91XW9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhgc5Q91XW9 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.25■■□□□ 1.63
Pcdhgc5Q91XW9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhgc5Q91XW9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhgc5Q91XW9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.25■■□□□ 1.63
Pcdhgc5Q91XW9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhgc5Q91XW9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhgc5Q91XW9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC25.25■■□□□ 1.63
Pcdhgc5Q91XW9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
Pcdhgc5Q91XW9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms