Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdh18Q8VHR0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh18Q8VHR0 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.35■■□□□ 1.01
Pcdh18Q8VHR0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh18Q8VHR0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh18Q8VHR0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh18Q8VHR0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh18Q8VHR0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh18Q8VHR0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pcdh18Q8VHR0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh18Q8VHR0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh18Q8VHR0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh18Q8VHR0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdh18Q8VHR0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh18Q8VHR0 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.34■■□□□ 1.01
Pcdh18Q8VHR0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh18Q8VHR0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Pcdh18Q8VHR0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh18Q8VHR0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh18Q8VHR0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh18Q8VHR0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.33■■□□□ 1.01
Pcdh18Q8VHR0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdh18Q8VHR0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.33■■□□□ 1
Pcdh18Q8VHR0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Pcdh18Q8VHR0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdh18Q8VHR0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdh18Q8VHR0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Pcdh18Q8VHR0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.32■■□□□ 1
Pcdh18Q8VHR0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdh18Q8VHR0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdh18Q8VHR0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh18Q8VHR0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdh18Q8VHR0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdh18Q8VHR0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.31■■□□□ 1
Pcdh18Q8VHR0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pcdh18Q8VHR0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh18Q8VHR0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh18Q8VHR0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh18Q8VHR0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh18Q8VHR0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Pcdh18Q8VHR0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh18Q8VHR0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh18Q8VHR0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh18Q8VHR0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdh18Q8VHR0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh18Q8VHR0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdh18Q8VHR0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdh18Q8VHR0 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.28■■□□□ 1
Pcdh18Q8VHR0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh18Q8VHR0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh18Q8VHR0 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.27■■□□□ 1
Pcdh18Q8VHR0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.27■■□□□ 1
Pcdh18Q8VHR0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdh18Q8VHR0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh18Q8VHR0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh18Q8VHR0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh18Q8VHR0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh18Q8VHR0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdh18Q8VHR0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdh18Q8VHR0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdh18Q8VHR0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh18Q8VHR0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh18Q8VHR0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh18Q8VHR0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh18Q8VHR0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh18Q8VHR0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh18Q8VHR0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdh18Q8VHR0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh18Q8VHR0 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.23■□□□□ 0.99
Pcdh18Q8VHR0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh18Q8VHR0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh18Q8VHR0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdh18Q8VHR0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh18Q8VHR0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.23■□□□□ 0.99
Pcdh18Q8VHR0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh18Q8VHR0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh18Q8VHR0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Pcdh18Q8VHR0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh18Q8VHR0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh18Q8VHR0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdh18Q8VHR0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh18Q8VHR0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh18Q8VHR0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh18Q8VHR0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh18Q8VHR0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh18Q8VHR0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh18Q8VHR0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh18Q8VHR0 Gm6821-201ENSMUST00000107540 542 ntBASIC21.19■□□□□ 0.98
Pcdh18Q8VHR0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh18Q8VHR0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdh18Q8VHR0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh18Q8VHR0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Pcdh18Q8VHR0 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.18■□□□□ 0.98
Pcdh18Q8VHR0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdh18Q8VHR0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pcdh18Q8VHR0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh18Q8VHR0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh18Q8VHR0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh18Q8VHR0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.17■□□□□ 0.98
Pcdh18Q8VHR0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms