Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Rnf8Q8VC56 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rnf8Q8VC56 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.29■■□□□ 1
Rnf8Q8VC56 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.29■■□□□ 1
Rnf8Q8VC56 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rnf8Q8VC56 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rnf8Q8VC56 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.28■■□□□ 1
Rnf8Q8VC56 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf8Q8VC56 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf8Q8VC56 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.28■■□□□ 1
Rnf8Q8VC56 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf8Q8VC56 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf8Q8VC56 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf8Q8VC56 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rnf8Q8VC56 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.27■□□□□ 0.99
Rnf8Q8VC56 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf8Q8VC56 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Rnf8Q8VC56 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf8Q8VC56 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf8Q8VC56 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf8Q8VC56 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf8Q8VC56 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf8Q8VC56 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf8Q8VC56 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf8Q8VC56 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf8Q8VC56 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf8Q8VC56 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rnf8Q8VC56 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf8Q8VC56 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf8Q8VC56 Gm4799-201ENSMUST00000095396 657 ntBASIC21.25■□□□□ 0.99
Rnf8Q8VC56 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf8Q8VC56 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf8Q8VC56 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rnf8Q8VC56 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf8Q8VC56 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf8Q8VC56 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rnf8Q8VC56 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.24■□□□□ 0.99
Rnf8Q8VC56 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.24■□□□□ 0.99
Rnf8Q8VC56 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf8Q8VC56 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf8Q8VC56 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf8Q8VC56 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.23■□□□□ 0.99
Rnf8Q8VC56 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rnf8Q8VC56 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf8Q8VC56 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf8Q8VC56 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf8Q8VC56 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf8Q8VC56 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf8Q8VC56 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf8Q8VC56 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rnf8Q8VC56 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf8Q8VC56 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf8Q8VC56 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf8Q8VC56 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf8Q8VC56 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf8Q8VC56 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rnf8Q8VC56 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf8Q8VC56 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.21■□□□□ 0.99
Rnf8Q8VC56 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf8Q8VC56 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Rnf8Q8VC56 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf8Q8VC56 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf8Q8VC56 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.2■□□□□ 0.98
Rnf8Q8VC56 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf8Q8VC56 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf8Q8VC56 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Rnf8Q8VC56 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rnf8Q8VC56 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf8Q8VC56 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf8Q8VC56 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf8Q8VC56 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf8Q8VC56 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf8Q8VC56 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rnf8Q8VC56 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf8Q8VC56 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf8Q8VC56 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.18■□□□□ 0.98
Rnf8Q8VC56 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rnf8Q8VC56 Gm6311-201ENSMUST00000073790 878 ntBASIC21.18■□□□□ 0.98
Rnf8Q8VC56 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf8Q8VC56 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.18■□□□□ 0.98
Rnf8Q8VC56 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf8Q8VC56 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf8Q8VC56 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf8Q8VC56 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Rnf8Q8VC56 Mir3960-201ENSMUST00000198213 73 ntBASIC21.17■□□□□ 0.98
Rnf8Q8VC56 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf8Q8VC56 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.17■□□□□ 0.98
Rnf8Q8VC56 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf8Q8VC56 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rnf8Q8VC56 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf8Q8VC56 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf8Q8VC56 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf8Q8VC56 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.16■□□□□ 0.98
Rnf8Q8VC56 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.16■□□□□ 0.98
Rnf8Q8VC56 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.16■□□□□ 0.98
Rnf8Q8VC56 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf8Q8VC56 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
Rnf8Q8VC56 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.15■□□□□ 0.98
Rnf8Q8VC56 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf8Q8VC56 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 153.7 ms