Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Tmc1Q8R4P5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Tmc1Q8R4P5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Tmc1Q8R4P5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC27.41■■□□□ 1.98
Tmc1Q8R4P5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Tmc1Q8R4P5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Tmc1Q8R4P5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Tmc1Q8R4P5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.39■■□□□ 1.98
Tmc1Q8R4P5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Tmc1Q8R4P5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC27.37■■□□□ 1.97
Tmc1Q8R4P5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Tmc1Q8R4P5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Tmc1Q8R4P5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Tmc1Q8R4P5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Tmc1Q8R4P5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Tmc1Q8R4P5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Tmc1Q8R4P5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Tmc1Q8R4P5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Tmc1Q8R4P5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC27.36■■□□□ 1.97
Tmc1Q8R4P5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Tmc1Q8R4P5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Tmc1Q8R4P5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Tmc1Q8R4P5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Tmc1Q8R4P5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC27.34■■□□□ 1.97
Tmc1Q8R4P5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Tmc1Q8R4P5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Tmc1Q8R4P5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Tmc1Q8R4P5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Tmc1Q8R4P5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Tmc1Q8R4P5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Tmc1Q8R4P5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Tmc1Q8R4P5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC27.31■■□□□ 1.96
Tmc1Q8R4P5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Tmc1Q8R4P5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Tmc1Q8R4P5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Tmc1Q8R4P5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC27.3■■□□□ 1.96
Tmc1Q8R4P5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Tmc1Q8R4P5 Gm11599-201ENSMUST00000118720 878 ntBASIC27.3■■□□□ 1.96
Tmc1Q8R4P5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Tmc1Q8R4P5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.3■■□□□ 1.96
Tmc1Q8R4P5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Tmc1Q8R4P5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Tmc1Q8R4P5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Tmc1Q8R4P5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Tmc1Q8R4P5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Tmc1Q8R4P5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
Tmc1Q8R4P5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.29■■□□□ 1.96
Tmc1Q8R4P5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Tmc1Q8R4P5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Tmc1Q8R4P5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Tmc1Q8R4P5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.27■■□□□ 1.96
Tmc1Q8R4P5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Tmc1Q8R4P5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Tmc1Q8R4P5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Tmc1Q8R4P5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Tmc1Q8R4P5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.25■■□□□ 1.95
Tmc1Q8R4P5 Gm37136-201ENSMUST00000194368 194 ntBASIC27.25■■□□□ 1.95
Tmc1Q8R4P5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Tmc1Q8R4P5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.25■■□□□ 1.95
Tmc1Q8R4P5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Tmc1Q8R4P5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Tmc1Q8R4P5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC27.25■■□□□ 1.95
Tmc1Q8R4P5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Tmc1Q8R4P5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC27.24■■□□□ 1.95
Tmc1Q8R4P5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Tmc1Q8R4P5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.23■■□□□ 1.95
Tmc1Q8R4P5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Tmc1Q8R4P5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
Tmc1Q8R4P5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.23■■□□□ 1.95
Tmc1Q8R4P5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
Tmc1Q8R4P5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Tmc1Q8R4P5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Tmc1Q8R4P5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Tmc1Q8R4P5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Tmc1Q8R4P5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Tmc1Q8R4P5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Tmc1Q8R4P5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.19■■□□□ 1.94
Tmc1Q8R4P5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Tmc1Q8R4P5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Tmc1Q8R4P5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Tmc1Q8R4P5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Tmc1Q8R4P5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Tmc1Q8R4P5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.17■■□□□ 1.94
Tmc1Q8R4P5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Tmc1Q8R4P5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Tmc1Q8R4P5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Tmc1Q8R4P5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Tmc1Q8R4P5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Tmc1Q8R4P5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC27.16■■□□□ 1.94
Tmc1Q8R4P5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Tmc1Q8R4P5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Tmc1Q8R4P5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Tmc1Q8R4P5 Gm6277-202ENSMUST00000224036 2779 ntBASIC27.15■■□□□ 1.94
Tmc1Q8R4P5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Tmc1Q8R4P5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Tmc1Q8R4P5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Tmc1Q8R4P5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC27.14■■□□□ 1.93
Tmc1Q8R4P5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Tmc1Q8R4P5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Tmc1Q8R4P5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms