Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clrn1Q8K445 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clrn1Q8K445 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Clrn1Q8K445 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21■□□□□ 0.95
Clrn1Q8K445 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clrn1Q8K445 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clrn1Q8K445 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clrn1Q8K445 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clrn1Q8K445 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clrn1Q8K445 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clrn1Q8K445 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clrn1Q8K445 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clrn1Q8K445 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clrn1Q8K445 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.98■□□□□ 0.95
Clrn1Q8K445 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clrn1Q8K445 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Clrn1Q8K445 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clrn1Q8K445 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clrn1Q8K445 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clrn1Q8K445 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.97■□□□□ 0.95
Clrn1Q8K445 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clrn1Q8K445 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clrn1Q8K445 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clrn1Q8K445 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clrn1Q8K445 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clrn1Q8K445 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clrn1Q8K445 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clrn1Q8K445 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.96■□□□□ 0.95
Clrn1Q8K445 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clrn1Q8K445 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.96■□□□□ 0.95
Clrn1Q8K445 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clrn1Q8K445 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clrn1Q8K445 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clrn1Q8K445 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clrn1Q8K445 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clrn1Q8K445 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clrn1Q8K445 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clrn1Q8K445 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clrn1Q8K445 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clrn1Q8K445 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Clrn1Q8K445 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.94■□□□□ 0.94
Clrn1Q8K445 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clrn1Q8K445 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clrn1Q8K445 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clrn1Q8K445 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clrn1Q8K445 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.93■□□□□ 0.94
Clrn1Q8K445 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clrn1Q8K445 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clrn1Q8K445 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clrn1Q8K445 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clrn1Q8K445 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clrn1Q8K445 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.92■□□□□ 0.94
Clrn1Q8K445 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Clrn1Q8K445 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clrn1Q8K445 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn1Q8K445 Gm11175-201ENSMUST00000116172 543 ntBASIC20.91■□□□□ 0.94
Clrn1Q8K445 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn1Q8K445 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.91■□□□□ 0.94
Clrn1Q8K445 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn1Q8K445 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn1Q8K445 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn1Q8K445 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn1Q8K445 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn1Q8K445 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn1Q8K445 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn1Q8K445 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.9■□□□□ 0.94
Clrn1Q8K445 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clrn1Q8K445 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.89■□□□□ 0.93
Clrn1Q8K445 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clrn1Q8K445 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn1Q8K445 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn1Q8K445 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn1Q8K445 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn1Q8K445 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn1Q8K445 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Clrn1Q8K445 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn1Q8K445 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn1Q8K445 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Clrn1Q8K445 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn1Q8K445 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Clrn1Q8K445 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Clrn1Q8K445 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn1Q8K445 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Clrn1Q8K445 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn1Q8K445 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.85■□□□□ 0.93
Clrn1Q8K445 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Clrn1Q8K445 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.85■□□□□ 0.93
Clrn1Q8K445 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.84■□□□□ 0.93
Clrn1Q8K445 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn1Q8K445 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn1Q8K445 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.84■□□□□ 0.93
Clrn1Q8K445 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn1Q8K445 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Clrn1Q8K445 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn1Q8K445 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn1Q8K445 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn1Q8K445 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn1Q8K445 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.83■□□□□ 0.93
Clrn1Q8K445 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.83■□□□□ 0.93
Clrn1Q8K445 Gm44428-201ENSMUST00000204474 874 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms