Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.39■■□□□ 1.82
Shisa4Q8CA71 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.39■■□□□ 1.82
Shisa4Q8CA71 Gm5786-201ENSMUST00000085368 882 ntBASIC26.39■■□□□ 1.82
Shisa4Q8CA71 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Shisa4Q8CA71 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
Shisa4Q8CA71 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Shisa4Q8CA71 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.37■■□□□ 1.81
Shisa4Q8CA71 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Shisa4Q8CA71 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Shisa4Q8CA71 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Shisa4Q8CA71 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Shisa4Q8CA71 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Shisa4Q8CA71 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Shisa4Q8CA71 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.36■■□□□ 1.81
Shisa4Q8CA71 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Shisa4Q8CA71 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Shisa4Q8CA71 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Shisa4Q8CA71 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Shisa4Q8CA71 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Shisa4Q8CA71 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Shisa4Q8CA71 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Shisa4Q8CA71 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Shisa4Q8CA71 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Shisa4Q8CA71 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Shisa4Q8CA71 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Shisa4Q8CA71 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Shisa4Q8CA71 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Shisa4Q8CA71 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.34■■□□□ 1.81
Shisa4Q8CA71 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Shisa4Q8CA71 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Shisa4Q8CA71 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.33■■□□□ 1.81
Shisa4Q8CA71 Gm14523-201ENSMUST00000117260 558 ntBASIC26.33■■□□□ 1.81
Shisa4Q8CA71 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.33■■□□□ 1.81
Shisa4Q8CA71 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Shisa4Q8CA71 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Shisa4Q8CA71 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Shisa4Q8CA71 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shisa4Q8CA71 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.31■■□□□ 1.8
Shisa4Q8CA71 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Shisa4Q8CA71 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Shisa4Q8CA71 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.3■■□□□ 1.8
Shisa4Q8CA71 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.3■■□□□ 1.8
Shisa4Q8CA71 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shisa4Q8CA71 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.3■■□□□ 1.8
Shisa4Q8CA71 Gm44428-201ENSMUST00000204474 874 ntBASIC26.3■■□□□ 1.8
Shisa4Q8CA71 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shisa4Q8CA71 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shisa4Q8CA71 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Shisa4Q8CA71 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Shisa4Q8CA71 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.29■■□□□ 1.8
Shisa4Q8CA71 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Shisa4Q8CA71 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Shisa4Q8CA71 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Shisa4Q8CA71 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Shisa4Q8CA71 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.27■■□□□ 1.8
Shisa4Q8CA71 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Shisa4Q8CA71 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Shisa4Q8CA71 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Shisa4Q8CA71 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Shisa4Q8CA71 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Shisa4Q8CA71 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.25■■□□□ 1.79
Shisa4Q8CA71 Gm7332-201ENSMUST00000118351 454 ntBASIC26.24■■□□□ 1.79
Shisa4Q8CA71 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Shisa4Q8CA71 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Shisa4Q8CA71 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Shisa4Q8CA71 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
Shisa4Q8CA71 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Shisa4Q8CA71 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shisa4Q8CA71 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Shisa4Q8CA71 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shisa4Q8CA71 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shisa4Q8CA71 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Shisa4Q8CA71 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shisa4Q8CA71 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Shisa4Q8CA71 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.22■■□□□ 1.79
Shisa4Q8CA71 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.22■■□□□ 1.79
Shisa4Q8CA71 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Shisa4Q8CA71 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Shisa4Q8CA71 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.2■■□□□ 1.78
Shisa4Q8CA71 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Shisa4Q8CA71 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shisa4Q8CA71 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Shisa4Q8CA71 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.19■■□□□ 1.78
Shisa4Q8CA71 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shisa4Q8CA71 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Shisa4Q8CA71 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shisa4Q8CA71 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Shisa4Q8CA71 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Shisa4Q8CA71 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Shisa4Q8CA71 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.17■■□□□ 1.78
Shisa4Q8CA71 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shisa4Q8CA71 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shisa4Q8CA71 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shisa4Q8CA71 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shisa4Q8CA71 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Shisa4Q8CA71 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shisa4Q8CA71 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Shisa4Q8CA71 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shisa4Q8CA71 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.16■■□□□ 1.78
Shisa4Q8CA71 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms