Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pabpc5Q8C7D3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pabpc5Q8C7D3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pabpc5Q8C7D3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pabpc5Q8C7D3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pabpc5Q8C7D3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pabpc5Q8C7D3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pabpc5Q8C7D3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pabpc5Q8C7D3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Pabpc5Q8C7D3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pabpc5Q8C7D3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pabpc5Q8C7D3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pabpc5Q8C7D3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pabpc5Q8C7D3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pabpc5Q8C7D3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pabpc5Q8C7D3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pabpc5Q8C7D3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pabpc5Q8C7D3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.22■■□□□ 1.15
Pabpc5Q8C7D3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.22■■□□□ 1.15
Pabpc5Q8C7D3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.22■■□□□ 1.15
Pabpc5Q8C7D3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pabpc5Q8C7D3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pabpc5Q8C7D3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pabpc5Q8C7D3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pabpc5Q8C7D3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Pabpc5Q8C7D3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.21■■□□□ 1.15
Pabpc5Q8C7D3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pabpc5Q8C7D3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pabpc5Q8C7D3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pabpc5Q8C7D3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pabpc5Q8C7D3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Pabpc5Q8C7D3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.2■■□□□ 1.14
Pabpc5Q8C7D3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Pabpc5Q8C7D3 Gm22567-201ENSMUST00000175542 342 ntBASIC22.19■■□□□ 1.14
Pabpc5Q8C7D3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pabpc5Q8C7D3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pabpc5Q8C7D3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
Pabpc5Q8C7D3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.18■■□□□ 1.14
Pabpc5Q8C7D3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pabpc5Q8C7D3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Pabpc5Q8C7D3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Pabpc5Q8C7D3 Gm44428-201ENSMUST00000204474 874 ntBASIC22.16■■□□□ 1.14
Pabpc5Q8C7D3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pabpc5Q8C7D3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Pabpc5Q8C7D3 Gm14523-201ENSMUST00000117260 558 ntBASIC22.14■■□□□ 1.13
Pabpc5Q8C7D3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Pabpc5Q8C7D3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pabpc5Q8C7D3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Pabpc5Q8C7D3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Pabpc5Q8C7D3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pabpc5Q8C7D3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Pabpc5Q8C7D3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pabpc5Q8C7D3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.12■■□□□ 1.13
Pabpc5Q8C7D3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pabpc5Q8C7D3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pabpc5Q8C7D3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pabpc5Q8C7D3 Gm5812-201ENSMUST00000061073 957 ntBASIC22.12■■□□□ 1.13
Pabpc5Q8C7D3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pabpc5Q8C7D3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pabpc5Q8C7D3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Pabpc5Q8C7D3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pabpc5Q8C7D3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pabpc5Q8C7D3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.11■■□□□ 1.13
Pabpc5Q8C7D3 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.11■■□□□ 1.13
Pabpc5Q8C7D3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
Pabpc5Q8C7D3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pabpc5Q8C7D3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.1■■□□□ 1.13
Pabpc5Q8C7D3 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.1■■□□□ 1.13
Pabpc5Q8C7D3 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.1■■□□□ 1.13
Pabpc5Q8C7D3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Pabpc5Q8C7D3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pabpc5Q8C7D3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pabpc5Q8C7D3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pabpc5Q8C7D3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pabpc5Q8C7D3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.08■■□□□ 1.13
Pabpc5Q8C7D3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pabpc5Q8C7D3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pabpc5Q8C7D3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Pabpc5Q8C7D3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.07■■□□□ 1.12
Pabpc5Q8C7D3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pabpc5Q8C7D3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pabpc5Q8C7D3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pabpc5Q8C7D3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pabpc5Q8C7D3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pabpc5Q8C7D3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Pabpc5Q8C7D3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pabpc5Q8C7D3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.06■■□□□ 1.12
Pabpc5Q8C7D3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.06■■□□□ 1.12
Pabpc5Q8C7D3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.06■■□□□ 1.12
Pabpc5Q8C7D3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.06■■□□□ 1.12
Pabpc5Q8C7D3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pabpc5Q8C7D3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Pabpc5Q8C7D3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pabpc5Q8C7D3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pabpc5Q8C7D3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pabpc5Q8C7D3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pabpc5Q8C7D3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pabpc5Q8C7D3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pabpc5Q8C7D3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pabpc5Q8C7D3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms