Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lsm11Q8BUV6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm11Q8BUV6 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.95■□□□□ 0.62
Lsm11Q8BUV6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.95■□□□□ 0.62
Lsm11Q8BUV6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm11Q8BUV6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm11Q8BUV6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm11Q8BUV6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm11Q8BUV6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm11Q8BUV6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.93■□□□□ 0.62
Lsm11Q8BUV6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm11Q8BUV6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lsm11Q8BUV6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lsm11Q8BUV6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Lsm11Q8BUV6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm11Q8BUV6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm11Q8BUV6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm11Q8BUV6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm11Q8BUV6 Nkain2-201ENSMUST00000092602 558 ntBASIC18.91■□□□□ 0.62
Lsm11Q8BUV6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm11Q8BUV6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lsm11Q8BUV6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm11Q8BUV6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.9■□□□□ 0.62
Lsm11Q8BUV6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm11Q8BUV6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm11Q8BUV6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm11Q8BUV6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm11Q8BUV6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm11Q8BUV6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm11Q8BUV6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Lsm11Q8BUV6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Lsm11Q8BUV6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm11Q8BUV6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.89■□□□□ 0.61
Lsm11Q8BUV6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.89■□□□□ 0.61
Lsm11Q8BUV6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Lsm11Q8BUV6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm11Q8BUV6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm11Q8BUV6 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.88■□□□□ 0.61
Lsm11Q8BUV6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm11Q8BUV6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm11Q8BUV6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Lsm11Q8BUV6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm11Q8BUV6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm11Q8BUV6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm11Q8BUV6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm11Q8BUV6 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.86■□□□□ 0.61
Lsm11Q8BUV6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm11Q8BUV6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm11Q8BUV6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Lsm11Q8BUV6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm11Q8BUV6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.85■□□□□ 0.61
Lsm11Q8BUV6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm11Q8BUV6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm11Q8BUV6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm11Q8BUV6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm11Q8BUV6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm11Q8BUV6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm11Q8BUV6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm11Q8BUV6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm11Q8BUV6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Lsm11Q8BUV6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.83■□□□□ 0.6
Lsm11Q8BUV6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm11Q8BUV6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm11Q8BUV6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm11Q8BUV6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm11Q8BUV6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm11Q8BUV6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm11Q8BUV6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm11Q8BUV6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.82■□□□□ 0.6
Lsm11Q8BUV6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lsm11Q8BUV6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm11Q8BUV6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm11Q8BUV6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm11Q8BUV6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lsm11Q8BUV6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Lsm11Q8BUV6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.81■□□□□ 0.6
Lsm11Q8BUV6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm11Q8BUV6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lsm11Q8BUV6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm11Q8BUV6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm11Q8BUV6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm11Q8BUV6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm11Q8BUV6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm11Q8BUV6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm11Q8BUV6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm11Q8BUV6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.79■□□□□ 0.6
Lsm11Q8BUV6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm11Q8BUV6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Lsm11Q8BUV6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm11Q8BUV6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm11Q8BUV6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.78■□□□□ 0.6
Lsm11Q8BUV6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.78■□□□□ 0.6
Lsm11Q8BUV6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.78■□□□□ 0.6
Lsm11Q8BUV6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.78■□□□□ 0.6
Lsm11Q8BUV6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm11Q8BUV6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm11Q8BUV6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Lsm11Q8BUV6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm11Q8BUV6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Lsm11Q8BUV6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms