Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.04■■□□□ 1.28
Ccdc40Q8BI79 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc40Q8BI79 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.04■■□□□ 1.28
Ccdc40Q8BI79 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc40Q8BI79 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc40Q8BI79 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.03■■□□□ 1.28
Ccdc40Q8BI79 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.03■■□□□ 1.28
Ccdc40Q8BI79 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Ccdc40Q8BI79 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.03■■□□□ 1.28
Ccdc40Q8BI79 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc40Q8BI79 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc40Q8BI79 Gm45364-201ENSMUST00000210883 159 ntBASIC23.02■■□□□ 1.28
Ccdc40Q8BI79 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc40Q8BI79 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Ccdc40Q8BI79 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc40Q8BI79 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc40Q8BI79 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc40Q8BI79 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc40Q8BI79 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc40Q8BI79 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23■■□□□ 1.27
Ccdc40Q8BI79 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc40Q8BI79 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc40Q8BI79 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc40Q8BI79 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc40Q8BI79 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Ccdc40Q8BI79 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.98■■□□□ 1.27
Ccdc40Q8BI79 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc40Q8BI79 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.98■■□□□ 1.27
Ccdc40Q8BI79 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc40Q8BI79 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc40Q8BI79 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
Ccdc40Q8BI79 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc40Q8BI79 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Ccdc40Q8BI79 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc40Q8BI79 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc40Q8BI79 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc40Q8BI79 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc40Q8BI79 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ccdc40Q8BI79 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.96■■□□□ 1.27
Ccdc40Q8BI79 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ccdc40Q8BI79 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ccdc40Q8BI79 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Ccdc40Q8BI79 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
Ccdc40Q8BI79 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ccdc40Q8BI79 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.27
Ccdc40Q8BI79 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ccdc40Q8BI79 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ccdc40Q8BI79 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.94■■□□□ 1.26
Ccdc40Q8BI79 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.94■■□□□ 1.26
Ccdc40Q8BI79 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.94■■□□□ 1.26
Ccdc40Q8BI79 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ccdc40Q8BI79 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Ccdc40Q8BI79 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.93■■□□□ 1.26
Ccdc40Q8BI79 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.93■■□□□ 1.26
Ccdc40Q8BI79 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ccdc40Q8BI79 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc40Q8BI79 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.92■■□□□ 1.26
Ccdc40Q8BI79 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc40Q8BI79 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc40Q8BI79 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Ccdc40Q8BI79 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.92■■□□□ 1.26
Ccdc40Q8BI79 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc40Q8BI79 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ccdc40Q8BI79 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ccdc40Q8BI79 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ccdc40Q8BI79 Terc-201ENSMUST00000082862 423 ntBASIC22.9■■□□□ 1.26
Ccdc40Q8BI79 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ccdc40Q8BI79 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ccdc40Q8BI79 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Ccdc40Q8BI79 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.89■■□□□ 1.25
Ccdc40Q8BI79 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc40Q8BI79 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.25
Ccdc40Q8BI79 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc40Q8BI79 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc40Q8BI79 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc40Q8BI79 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc40Q8BI79 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc40Q8BI79 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc40Q8BI79 Notumos-201ENSMUST00000151998 2659 ntBASIC22.87■■□□□ 1.25
Ccdc40Q8BI79 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc40Q8BI79 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Ccdc40Q8BI79 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc40Q8BI79 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc40Q8BI79 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.86■■□□□ 1.25
Ccdc40Q8BI79 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc40Q8BI79 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Ccdc40Q8BI79 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc40Q8BI79 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc40Q8BI79 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc40Q8BI79 Gm6311-201ENSMUST00000073790 878 ntBASIC22.85■■□□□ 1.25
Ccdc40Q8BI79 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc40Q8BI79 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc40Q8BI79 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc40Q8BI79 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc40Q8BI79 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
Ccdc40Q8BI79 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc40Q8BI79 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc40Q8BI79 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc40Q8BI79 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc40Q8BI79 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 249.7 ms