Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Trim6Q8BGE7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim6Q8BGE7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim6Q8BGE7 Gm37136-201ENSMUST00000194368 194 ntBASIC23.58■■□□□ 1.37
Trim6Q8BGE7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.58■■□□□ 1.37
Trim6Q8BGE7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.57■■□□□ 1.36
Trim6Q8BGE7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Trim6Q8BGE7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.57■■□□□ 1.36
Trim6Q8BGE7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim6Q8BGE7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim6Q8BGE7 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.56■■□□□ 1.36
Trim6Q8BGE7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Trim6Q8BGE7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim6Q8BGE7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.55■■□□□ 1.36
Trim6Q8BGE7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim6Q8BGE7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim6Q8BGE7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim6Q8BGE7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trim6Q8BGE7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
Trim6Q8BGE7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim6Q8BGE7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trim6Q8BGE7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim6Q8BGE7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
Trim6Q8BGE7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.53■■□□□ 1.36
Trim6Q8BGE7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim6Q8BGE7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.53■■□□□ 1.36
Trim6Q8BGE7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim6Q8BGE7 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.53■■□□□ 1.36
Trim6Q8BGE7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.53■■□□□ 1.36
Trim6Q8BGE7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim6Q8BGE7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Trim6Q8BGE7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim6Q8BGE7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim6Q8BGE7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim6Q8BGE7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.51■■□□□ 1.35
Trim6Q8BGE7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Trim6Q8BGE7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Trim6Q8BGE7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim6Q8BGE7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim6Q8BGE7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim6Q8BGE7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim6Q8BGE7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trim6Q8BGE7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim6Q8BGE7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim6Q8BGE7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trim6Q8BGE7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim6Q8BGE7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim6Q8BGE7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim6Q8BGE7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.49■■□□□ 1.35
Trim6Q8BGE7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim6Q8BGE7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.49■■□□□ 1.35
Trim6Q8BGE7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim6Q8BGE7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim6Q8BGE7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.48■■□□□ 1.35
Trim6Q8BGE7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Trim6Q8BGE7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim6Q8BGE7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim6Q8BGE7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim6Q8BGE7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim6Q8BGE7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim6Q8BGE7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Trim6Q8BGE7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim6Q8BGE7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim6Q8BGE7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Trim6Q8BGE7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Trim6Q8BGE7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Trim6Q8BGE7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.34
Trim6Q8BGE7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim6Q8BGE7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Trim6Q8BGE7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.44■■□□□ 1.34
Trim6Q8BGE7 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.43■■□□□ 1.34
Trim6Q8BGE7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim6Q8BGE7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim6Q8BGE7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Trim6Q8BGE7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.43■■□□□ 1.34
Trim6Q8BGE7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trim6Q8BGE7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trim6Q8BGE7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Trim6Q8BGE7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trim6Q8BGE7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trim6Q8BGE7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.41■■□□□ 1.34
Trim6Q8BGE7 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.41■■□□□ 1.34
Trim6Q8BGE7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Trim6Q8BGE7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim6Q8BGE7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim6Q8BGE7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Trim6Q8BGE7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim6Q8BGE7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.4■■□□□ 1.34
Trim6Q8BGE7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Trim6Q8BGE7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Trim6Q8BGE7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim6Q8BGE7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim6Q8BGE7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
Trim6Q8BGE7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trim6Q8BGE7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trim6Q8BGE7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trim6Q8BGE7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Trim6Q8BGE7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Trim6Q8BGE7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim6Q8BGE7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms