Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.14■□□□□ 0.81
Ubr5Q80TP3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr5Q80TP3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.13■□□□□ 0.81
Ubr5Q80TP3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr5Q80TP3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr5Q80TP3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr5Q80TP3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr5Q80TP3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ubr5Q80TP3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr5Q80TP3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr5Q80TP3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr5Q80TP3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr5Q80TP3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.1■□□□□ 0.81
Ubr5Q80TP3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.1■□□□□ 0.81
Ubr5Q80TP3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr5Q80TP3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr5Q80TP3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr5Q80TP3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr5Q80TP3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.09■□□□□ 0.81
Ubr5Q80TP3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.08■□□□□ 0.81
Ubr5Q80TP3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.08■□□□□ 0.81
Ubr5Q80TP3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr5Q80TP3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr5Q80TP3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr5Q80TP3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.08■□□□□ 0.8
Ubr5Q80TP3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.08■□□□□ 0.8
Ubr5Q80TP3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.08■□□□□ 0.8
Ubr5Q80TP3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.08■□□□□ 0.8
Ubr5Q80TP3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr5Q80TP3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr5Q80TP3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.07■□□□□ 0.8
Ubr5Q80TP3 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.07■□□□□ 0.8
Ubr5Q80TP3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ubr5Q80TP3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.07■□□□□ 0.8
Ubr5Q80TP3 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.06■□□□□ 0.8
Ubr5Q80TP3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr5Q80TP3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr5Q80TP3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ubr5Q80TP3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ubr5Q80TP3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
Ubr5Q80TP3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubr5Q80TP3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Ubr5Q80TP3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.04■□□□□ 0.8
Ubr5Q80TP3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr5Q80TP3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr5Q80TP3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr5Q80TP3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ubr5Q80TP3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr5Q80TP3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.02■□□□□ 0.8
Ubr5Q80TP3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.02■□□□□ 0.8
Ubr5Q80TP3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ubr5Q80TP3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.01■□□□□ 0.79
Ubr5Q80TP3 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.01■□□□□ 0.79
Ubr5Q80TP3 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.01■□□□□ 0.79
Ubr5Q80TP3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr5Q80TP3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr5Q80TP3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ubr5Q80TP3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr5Q80TP3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ubr5Q80TP3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr5Q80TP3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Ubr5Q80TP3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr5Q80TP3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.99■□□□□ 0.79
Ubr5Q80TP3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr5Q80TP3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr5Q80TP3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr5Q80TP3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ubr5Q80TP3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.98■□□□□ 0.79
Ubr5Q80TP3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr5Q80TP3 Gm9847-201ENSMUST00000052528 599 ntBASIC19.98■□□□□ 0.79
Ubr5Q80TP3 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.98■□□□□ 0.79
Ubr5Q80TP3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.98■□□□□ 0.79
Ubr5Q80TP3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr5Q80TP3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.97■□□□□ 0.79
Ubr5Q80TP3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr5Q80TP3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.97■□□□□ 0.79
Ubr5Q80TP3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.97■□□□□ 0.79
Ubr5Q80TP3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr5Q80TP3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr5Q80TP3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ubr5Q80TP3 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.96■□□□□ 0.79
Ubr5Q80TP3 Gm12922-201ENSMUST00000120626 809 ntBASIC19.95■□□□□ 0.78
Ubr5Q80TP3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr5Q80TP3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr5Q80TP3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.95■□□□□ 0.78
Ubr5Q80TP3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.95■□□□□ 0.78
Ubr5Q80TP3 Gm22238-201ENSMUST00000175222 88 ntBASIC19.94■□□□□ 0.78
Ubr5Q80TP3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.94■□□□□ 0.78
Ubr5Q80TP3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr5Q80TP3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr5Q80TP3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ubr5Q80TP3 Gm7417-201ENSMUST00000192950 473 ntBASIC19.93■□□□□ 0.78
Ubr5Q80TP3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr5Q80TP3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr5Q80TP3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr5Q80TP3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr5Q80TP3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr5Q80TP3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ubr5Q80TP3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr5Q80TP3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms