Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Cspg5Q71M36 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
Cspg5Q71M36 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cspg5Q71M36 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.95■■□□□ 1.26
Cspg5Q71M36 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Cspg5Q71M36 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.95■■□□□ 1.26
Cspg5Q71M36 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Cspg5Q71M36 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cspg5Q71M36 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.94■■□□□ 1.26
Cspg5Q71M36 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cspg5Q71M36 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.93■■□□□ 1.26
Cspg5Q71M36 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cspg5Q71M36 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Cspg5Q71M36 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cspg5Q71M36 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cspg5Q71M36 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cspg5Q71M36 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cspg5Q71M36 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.92■■□□□ 1.26
Cspg5Q71M36 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cspg5Q71M36 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Cspg5Q71M36 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Cspg5Q71M36 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.91■■□□□ 1.26
Cspg5Q71M36 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.91■■□□□ 1.26
Cspg5Q71M36 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Cspg5Q71M36 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.91■■□□□ 1.26
Cspg5Q71M36 Rps24-207ENSMUST00000224568 714 ntBASIC22.91■■□□□ 1.26
Cspg5Q71M36 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cspg5Q71M36 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cspg5Q71M36 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cspg5Q71M36 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Cspg5Q71M36 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.9■■□□□ 1.26
Cspg5Q71M36 Gm44428-201ENSMUST00000204474 874 ntBASIC22.9■■□□□ 1.26
Cspg5Q71M36 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cspg5Q71M36 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cspg5Q71M36 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cspg5Q71M36 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cspg5Q71M36 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cspg5Q71M36 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cspg5Q71M36 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.89■■□□□ 1.25
Cspg5Q71M36 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cspg5Q71M36 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cspg5Q71M36 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cspg5Q71M36 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
Cspg5Q71M36 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cspg5Q71M36 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cspg5Q71M36 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cspg5Q71M36 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cspg5Q71M36 Gm13238-201ENSMUST00000117655 780 ntBASIC22.86■■□□□ 1.25
Cspg5Q71M36 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cspg5Q71M36 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
Cspg5Q71M36 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.85■■□□□ 1.25
Cspg5Q71M36 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Cspg5Q71M36 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.85■■□□□ 1.25
Cspg5Q71M36 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.85■■□□□ 1.25
Cspg5Q71M36 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Cspg5Q71M36 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Cspg5Q71M36 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cspg5Q71M36 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Cspg5Q71M36 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cspg5Q71M36 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cspg5Q71M36 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cspg5Q71M36 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cspg5Q71M36 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.83■■□□□ 1.25
Cspg5Q71M36 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.83■■□□□ 1.25
Cspg5Q71M36 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cspg5Q71M36 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cspg5Q71M36 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cspg5Q71M36 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cspg5Q71M36 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Cspg5Q71M36 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cspg5Q71M36 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cspg5Q71M36 Gm14117-201ENSMUST00000122417 843 ntBASIC22.81■■□□□ 1.24
Cspg5Q71M36 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cspg5Q71M36 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cspg5Q71M36 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.8■■□□□ 1.24
Cspg5Q71M36 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
Cspg5Q71M36 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Cspg5Q71M36 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cspg5Q71M36 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cspg5Q71M36 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cspg5Q71M36 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cspg5Q71M36 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cspg5Q71M36 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.78■■□□□ 1.24
Cspg5Q71M36 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cspg5Q71M36 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cspg5Q71M36 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.76■■□□□ 1.23
Cspg5Q71M36 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Cspg5Q71M36 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cspg5Q71M36 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Cspg5Q71M36 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cspg5Q71M36 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.75■■□□□ 1.23
Cspg5Q71M36 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cspg5Q71M36 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cspg5Q71M36 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Cspg5Q71M36 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Cspg5Q71M36 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Cspg5Q71M36 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cspg5Q71M36 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cspg5Q71M36 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cspg5Q71M36 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms