Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Shc4Q6S5L9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.82■□□□□ 0.92
Shc4Q6S5L9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shc4Q6S5L9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shc4Q6S5L9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shc4Q6S5L9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Shc4Q6S5L9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shc4Q6S5L9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shc4Q6S5L9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shc4Q6S5L9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shc4Q6S5L9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.8■□□□□ 0.92
Shc4Q6S5L9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shc4Q6S5L9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shc4Q6S5L9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Shc4Q6S5L9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shc4Q6S5L9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shc4Q6S5L9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Shc4Q6S5L9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shc4Q6S5L9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shc4Q6S5L9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shc4Q6S5L9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shc4Q6S5L9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.76■□□□□ 0.91
Shc4Q6S5L9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shc4Q6S5L9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shc4Q6S5L9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shc4Q6S5L9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shc4Q6S5L9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Shc4Q6S5L9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Shc4Q6S5L9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shc4Q6S5L9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shc4Q6S5L9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shc4Q6S5L9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shc4Q6S5L9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shc4Q6S5L9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shc4Q6S5L9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Shc4Q6S5L9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shc4Q6S5L9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Shc4Q6S5L9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shc4Q6S5L9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.73■□□□□ 0.91
Shc4Q6S5L9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shc4Q6S5L9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shc4Q6S5L9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Shc4Q6S5L9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shc4Q6S5L9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Shc4Q6S5L9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.73■□□□□ 0.91
Shc4Q6S5L9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shc4Q6S5L9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Shc4Q6S5L9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.72■□□□□ 0.91
Shc4Q6S5L9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.72■□□□□ 0.91
Shc4Q6S5L9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Shc4Q6S5L9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Shc4Q6S5L9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Shc4Q6S5L9 Gm5921-201ENSMUST00000075898 882 ntBASIC20.71■□□□□ 0.91
Shc4Q6S5L9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shc4Q6S5L9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Shc4Q6S5L9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shc4Q6S5L9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shc4Q6S5L9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shc4Q6S5L9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shc4Q6S5L9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shc4Q6S5L9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shc4Q6S5L9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shc4Q6S5L9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shc4Q6S5L9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.69■□□□□ 0.9
Shc4Q6S5L9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shc4Q6S5L9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shc4Q6S5L9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shc4Q6S5L9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shc4Q6S5L9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shc4Q6S5L9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Shc4Q6S5L9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shc4Q6S5L9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.68■□□□□ 0.9
Shc4Q6S5L9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Shc4Q6S5L9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shc4Q6S5L9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shc4Q6S5L9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shc4Q6S5L9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Shc4Q6S5L9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.66■□□□□ 0.9
Shc4Q6S5L9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Shc4Q6S5L9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Shc4Q6S5L9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Shc4Q6S5L9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Shc4Q6S5L9 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.66■□□□□ 0.9
Shc4Q6S5L9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shc4Q6S5L9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Shc4Q6S5L9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shc4Q6S5L9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shc4Q6S5L9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shc4Q6S5L9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shc4Q6S5L9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shc4Q6S5L9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Shc4Q6S5L9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shc4Q6S5L9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shc4Q6S5L9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.64■□□□□ 0.89
Shc4Q6S5L9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shc4Q6S5L9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shc4Q6S5L9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shc4Q6S5L9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shc4Q6S5L9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shc4Q6S5L9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms