Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Snrnp40Q6PE01 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Snrnp40Q6PE01 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Snrnp40Q6PE01 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.95■□□□□ 0.78
Snrnp40Q6PE01 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Snrnp40Q6PE01 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Snrnp40Q6PE01 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.95■□□□□ 0.78
Snrnp40Q6PE01 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Snrnp40Q6PE01 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Snrnp40Q6PE01 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Snrnp40Q6PE01 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Snrnp40Q6PE01 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Snrnp40Q6PE01 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Snrnp40Q6PE01 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Snrnp40Q6PE01 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Snrnp40Q6PE01 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Snrnp40Q6PE01 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Snrnp40Q6PE01 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.93■□□□□ 0.78
Snrnp40Q6PE01 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.93■□□□□ 0.78
Snrnp40Q6PE01 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Snrnp40Q6PE01 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Snrnp40Q6PE01 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Snrnp40Q6PE01 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Snrnp40Q6PE01 Etf1-202ENSMUST00000180351 108 ntBASIC19.92■□□□□ 0.78
Snrnp40Q6PE01 Gm10232-201ENSMUST00000089221 720 ntBASIC19.92■□□□□ 0.78
Snrnp40Q6PE01 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Snrnp40Q6PE01 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Snrnp40Q6PE01 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Snrnp40Q6PE01 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Snrnp40Q6PE01 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Snrnp40Q6PE01 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snrnp40Q6PE01 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Snrnp40Q6PE01 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.91■□□□□ 0.78
Snrnp40Q6PE01 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snrnp40Q6PE01 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snrnp40Q6PE01 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snrnp40Q6PE01 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Snrnp40Q6PE01 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snrnp40Q6PE01 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snrnp40Q6PE01 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snrnp40Q6PE01 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.89■□□□□ 0.77
Snrnp40Q6PE01 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Snrnp40Q6PE01 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snrnp40Q6PE01 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snrnp40Q6PE01 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snrnp40Q6PE01 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Snrnp40Q6PE01 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.88■□□□□ 0.77
Snrnp40Q6PE01 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Snrnp40Q6PE01 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.88■□□□□ 0.77
Snrnp40Q6PE01 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.88■□□□□ 0.77
Snrnp40Q6PE01 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snrnp40Q6PE01 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snrnp40Q6PE01 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.87■□□□□ 0.77
Snrnp40Q6PE01 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snrnp40Q6PE01 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.87■□□□□ 0.77
Snrnp40Q6PE01 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snrnp40Q6PE01 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Snrnp40Q6PE01 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Snrnp40Q6PE01 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Snrnp40Q6PE01 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snrnp40Q6PE01 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snrnp40Q6PE01 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Snrnp40Q6PE01 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Snrnp40Q6PE01 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Snrnp40Q6PE01 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snrnp40Q6PE01 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Snrnp40Q6PE01 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Snrnp40Q6PE01 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snrnp40Q6PE01 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Snrnp40Q6PE01 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snrnp40Q6PE01 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.83■□□□□ 0.77
Snrnp40Q6PE01 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Snrnp40Q6PE01 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Snrnp40Q6PE01 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snrnp40Q6PE01 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Snrnp40Q6PE01 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snrnp40Q6PE01 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Snrnp40Q6PE01 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.82■□□□□ 0.76
Snrnp40Q6PE01 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snrnp40Q6PE01 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snrnp40Q6PE01 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snrnp40Q6PE01 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.81■□□□□ 0.76
Snrnp40Q6PE01 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.81■□□□□ 0.76
Snrnp40Q6PE01 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Snrnp40Q6PE01 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Snrnp40Q6PE01 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snrnp40Q6PE01 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.81■□□□□ 0.76
Snrnp40Q6PE01 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snrnp40Q6PE01 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Snrnp40Q6PE01 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Snrnp40Q6PE01 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Snrnp40Q6PE01 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Snrnp40Q6PE01 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snrnp40Q6PE01 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snrnp40Q6PE01 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snrnp40Q6PE01 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snrnp40Q6PE01 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snrnp40Q6PE01 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snrnp40Q6PE01 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snrnp40Q6PE01 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms