Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox19Q62249 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.06■□□□□ 0.64
Sox19Q62249 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox19Q62249 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sox19Q62249 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox19Q62249 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox19Q62249 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox19Q62249 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sox19Q62249 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox19Q62249 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox19Q62249 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sox19Q62249 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox19Q62249 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox19Q62249 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Sox19Q62249 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sox19Q62249 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox19Q62249 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox19Q62249 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.02■□□□□ 0.64
Sox19Q62249 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox19Q62249 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox19Q62249 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox19Q62249 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox19Q62249 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox19Q62249 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox19Q62249 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19■□□□□ 0.63
Sox19Q62249 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sox19Q62249 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox19Q62249 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox19Q62249 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox19Q62249 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox19Q62249 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.99■□□□□ 0.63
Sox19Q62249 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox19Q62249 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox19Q62249 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox19Q62249 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox19Q62249 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox19Q62249 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sox19Q62249 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sox19Q62249 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox19Q62249 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox19Q62249 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sox19Q62249 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox19Q62249 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.97■□□□□ 0.63
Sox19Q62249 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox19Q62249 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sox19Q62249 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox19Q62249 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox19Q62249 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.95■□□□□ 0.62
Sox19Q62249 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox19Q62249 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sox19Q62249 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sox19Q62249 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox19Q62249 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox19Q62249 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sox19Q62249 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sox19Q62249 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox19Q62249 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox19Q62249 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sox19Q62249 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sox19Q62249 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.94■□□□□ 0.62
Sox19Q62249 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox19Q62249 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox19Q62249 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sox19Q62249 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sox19Q62249 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox19Q62249 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox19Q62249 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox19Q62249 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.92■□□□□ 0.62
Sox19Q62249 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox19Q62249 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.91■□□□□ 0.62
Sox19Q62249 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox19Q62249 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox19Q62249 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.91■□□□□ 0.62
Sox19Q62249 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox19Q62249 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sox19Q62249 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.9■□□□□ 0.62
Sox19Q62249 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sox19Q62249 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sox19Q62249 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sox19Q62249 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.89■□□□□ 0.61
Sox19Q62249 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox19Q62249 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox19Q62249 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.88■□□□□ 0.61
Sox19Q62249 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox19Q62249 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox19Q62249 Gm45855-201ENSMUST00000212546 880 ntBASIC18.88■□□□□ 0.61
Sox19Q62249 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.88■□□□□ 0.61
Sox19Q62249 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.88■□□□□ 0.61
Sox19Q62249 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox19Q62249 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox19Q62249 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox19Q62249 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox19Q62249 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sox19Q62249 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.87■□□□□ 0.61
Sox19Q62249 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.87■□□□□ 0.61
Sox19Q62249 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox19Q62249 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox19Q62249 Gm37136-201ENSMUST00000194368 194 ntBASIC18.86■□□□□ 0.61
Sox19Q62249 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.86■□□□□ 0.61
Sox19Q62249 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms