Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxd3Q61060 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxd3Q61060 Gm6311-201ENSMUST00000073790 878 ntBASIC20.27■□□□□ 0.84
Foxd3Q61060 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxd3Q61060 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxd3Q61060 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxd3Q61060 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd3Q61060 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Foxd3Q61060 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd3Q61060 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.26■□□□□ 0.83
Foxd3Q61060 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.26■□□□□ 0.83
Foxd3Q61060 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd3Q61060 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd3Q61060 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Foxd3Q61060 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Foxd3Q61060 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd3Q61060 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Foxd3Q61060 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd3Q61060 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd3Q61060 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd3Q61060 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd3Q61060 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd3Q61060 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Foxd3Q61060 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd3Q61060 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Foxd3Q61060 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Foxd3Q61060 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Foxd3Q61060 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd3Q61060 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd3Q61060 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd3Q61060 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxd3Q61060 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd3Q61060 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Foxd3Q61060 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd3Q61060 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd3Q61060 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Foxd3Q61060 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Foxd3Q61060 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxd3Q61060 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxd3Q61060 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Foxd3Q61060 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.19■□□□□ 0.82
Foxd3Q61060 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.19■□□□□ 0.82
Foxd3Q61060 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxd3Q61060 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd3Q61060 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Foxd3Q61060 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Foxd3Q61060 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd3Q61060 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.18■□□□□ 0.82
Foxd3Q61060 Gm4799-201ENSMUST00000095396 657 ntBASIC20.18■□□□□ 0.82
Foxd3Q61060 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxd3Q61060 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd3Q61060 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd3Q61060 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Foxd3Q61060 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.17■□□□□ 0.82
Foxd3Q61060 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd3Q61060 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxd3Q61060 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxd3Q61060 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Foxd3Q61060 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.16■□□□□ 0.82
Foxd3Q61060 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Foxd3Q61060 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.16■□□□□ 0.82
Foxd3Q61060 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Foxd3Q61060 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Foxd3Q61060 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd3Q61060 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Foxd3Q61060 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.15■□□□□ 0.82
Foxd3Q61060 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Foxd3Q61060 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd3Q61060 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxd3Q61060 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Foxd3Q61060 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd3Q61060 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd3Q61060 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd3Q61060 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxd3Q61060 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd3Q61060 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.13■□□□□ 0.81
Foxd3Q61060 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.13■□□□□ 0.81
Foxd3Q61060 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd3Q61060 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Foxd3Q61060 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd3Q61060 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd3Q61060 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd3Q61060 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd3Q61060 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxd3Q61060 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd3Q61060 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.12■□□□□ 0.81
Foxd3Q61060 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxd3Q61060 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Foxd3Q61060 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxd3Q61060 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.11■□□□□ 0.81
Foxd3Q61060 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.11■□□□□ 0.81
Foxd3Q61060 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Foxd3Q61060 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxd3Q61060 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Foxd3Q61060 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Foxd3Q61060 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Foxd3Q61060 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Foxd3Q61060 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Foxd3Q61060 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Foxd3Q61060 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms