Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r223Q5SSA0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r223Q5SSA0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.32■□□□□ 0.68
Vmn1r223Q5SSA0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r223Q5SSA0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r223Q5SSA0 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.32■□□□□ 0.68
Vmn1r223Q5SSA0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r223Q5SSA0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r223Q5SSA0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r223Q5SSA0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r223Q5SSA0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Vmn1r223Q5SSA0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r223Q5SSA0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r223Q5SSA0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r223Q5SSA0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vmn1r223Q5SSA0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r223Q5SSA0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r223Q5SSA0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r223Q5SSA0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vmn1r223Q5SSA0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r223Q5SSA0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r223Q5SSA0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.28■□□□□ 0.68
Vmn1r223Q5SSA0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r223Q5SSA0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Vmn1r223Q5SSA0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r223Q5SSA0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r223Q5SSA0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Vmn1r223Q5SSA0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vmn1r223Q5SSA0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vmn1r223Q5SSA0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vmn1r223Q5SSA0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r223Q5SSA0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r223Q5SSA0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r223Q5SSA0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r223Q5SSA0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r223Q5SSA0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r223Q5SSA0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r223Q5SSA0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r223Q5SSA0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r223Q5SSA0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r223Q5SSA0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r223Q5SSA0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Vmn1r223Q5SSA0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.25■□□□□ 0.67
Vmn1r223Q5SSA0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r223Q5SSA0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r223Q5SSA0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r223Q5SSA0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r223Q5SSA0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Vmn1r223Q5SSA0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vmn1r223Q5SSA0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vmn1r223Q5SSA0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vmn1r223Q5SSA0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Vmn1r223Q5SSA0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vmn1r223Q5SSA0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Vmn1r223Q5SSA0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vmn1r223Q5SSA0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Vmn1r223Q5SSA0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vmn1r223Q5SSA0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Vmn1r223Q5SSA0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Vmn1r223Q5SSA0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vmn1r223Q5SSA0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vmn1r223Q5SSA0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vmn1r223Q5SSA0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vmn1r223Q5SSA0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vmn1r223Q5SSA0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vmn1r223Q5SSA0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vmn1r223Q5SSA0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.21■□□□□ 0.67
Vmn1r223Q5SSA0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vmn1r223Q5SSA0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Vmn1r223Q5SSA0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vmn1r223Q5SSA0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vmn1r223Q5SSA0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Vmn1r223Q5SSA0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vmn1r223Q5SSA0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vmn1r223Q5SSA0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vmn1r223Q5SSA0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vmn1r223Q5SSA0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vmn1r223Q5SSA0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.19■□□□□ 0.66
Vmn1r223Q5SSA0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vmn1r223Q5SSA0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vmn1r223Q5SSA0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vmn1r223Q5SSA0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vmn1r223Q5SSA0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vmn1r223Q5SSA0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vmn1r223Q5SSA0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vmn1r223Q5SSA0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.17■□□□□ 0.66
Vmn1r223Q5SSA0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vmn1r223Q5SSA0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vmn1r223Q5SSA0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vmn1r223Q5SSA0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vmn1r223Q5SSA0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vmn1r223Q5SSA0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.16■□□□□ 0.66
Vmn1r223Q5SSA0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.16■□□□□ 0.66
Vmn1r223Q5SSA0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.16■□□□□ 0.66
Vmn1r223Q5SSA0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.16■□□□□ 0.66
Vmn1r223Q5SSA0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vmn1r223Q5SSA0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vmn1r223Q5SSA0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vmn1r223Q5SSA0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Vmn1r223Q5SSA0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 482.8 ms