Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav2Q5R1I9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav2Q5R1I9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav2Q5R1I9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav2Q5R1I9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav2Q5R1I9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav2Q5R1I9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav2Q5R1I9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav2Q5R1I9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav2Q5R1I9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav2Q5R1I9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav2Q5R1I9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav2Q5R1I9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav2Q5R1I9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav2Q5R1I9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav2Q5R1I9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav2Q5R1I9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trav2Q5R1I9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav2Q5R1I9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav2Q5R1I9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav2Q5R1I9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trav2Q5R1I9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav2Q5R1I9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav2Q5R1I9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav2Q5R1I9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav2Q5R1I9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav2Q5R1I9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav2Q5R1I9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav2Q5R1I9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav2Q5R1I9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav2Q5R1I9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav2Q5R1I9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav2Q5R1I9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav2Q5R1I9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav2Q5R1I9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav2Q5R1I9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Trav2Q5R1I9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.7■□□□□ 0.42
Trav2Q5R1I9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav2Q5R1I9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav2Q5R1I9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav2Q5R1I9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav2Q5R1I9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trav2Q5R1I9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav2Q5R1I9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav2Q5R1I9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav2Q5R1I9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav2Q5R1I9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav2Q5R1I9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav2Q5R1I9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.68■□□□□ 0.42
Trav2Q5R1I9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav2Q5R1I9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav2Q5R1I9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav2Q5R1I9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav2Q5R1I9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav2Q5R1I9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav2Q5R1I9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav2Q5R1I9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav2Q5R1I9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav2Q5R1I9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav2Q5R1I9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav2Q5R1I9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav2Q5R1I9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav2Q5R1I9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav2Q5R1I9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav2Q5R1I9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav2Q5R1I9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav2Q5R1I9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav2Q5R1I9 Gm5921-201ENSMUST00000075898 882 ntBASIC17.66■□□□□ 0.42
Trav2Q5R1I9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.66■□□□□ 0.42
Trav2Q5R1I9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.66■□□□□ 0.42
Trav2Q5R1I9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav2Q5R1I9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav2Q5R1I9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav2Q5R1I9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav2Q5R1I9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav2Q5R1I9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav2Q5R1I9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav2Q5R1I9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav2Q5R1I9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav2Q5R1I9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav2Q5R1I9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav2Q5R1I9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav2Q5R1I9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav2Q5R1I9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav2Q5R1I9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav2Q5R1I9 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.63■□□□□ 0.41
Trav2Q5R1I9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav2Q5R1I9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav2Q5R1I9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav2Q5R1I9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav2Q5R1I9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav2Q5R1I9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav2Q5R1I9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav2Q5R1I9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Trav2Q5R1I9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trav2Q5R1I9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav2Q5R1I9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav2Q5R1I9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav2Q5R1I9 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.61■□□□□ 0.41
Trav2Q5R1I9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 180.3 ms