Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Col5a2Q3U962 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC27.35■■□□□ 1.97
Col5a2Q3U962 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Col5a2Q3U962 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.35■■□□□ 1.97
Col5a2Q3U962 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Col5a2Q3U962 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC27.34■■□□□ 1.97
Col5a2Q3U962 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Col5a2Q3U962 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Col5a2Q3U962 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.34■■□□□ 1.97
Col5a2Q3U962 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC27.33■■□□□ 1.97
Col5a2Q3U962 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Col5a2Q3U962 Gm10232-201ENSMUST00000089221 720 ntBASIC27.33■■□□□ 1.97
Col5a2Q3U962 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
Col5a2Q3U962 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Col5a2Q3U962 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Col5a2Q3U962 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col5a2Q3U962 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Col5a2Q3U962 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col5a2Q3U962 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col5a2Q3U962 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col5a2Q3U962 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
Col5a2Q3U962 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC27.31■■□□□ 1.96
Col5a2Q3U962 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Col5a2Q3U962 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col5a2Q3U962 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col5a2Q3U962 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Col5a2Q3U962 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Col5a2Q3U962 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Col5a2Q3U962 Gm5131-201ENSMUST00000212776 1238 ntBASIC27.29■■□□□ 1.96
Col5a2Q3U962 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Col5a2Q3U962 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.29■■□□□ 1.96
Col5a2Q3U962 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Col5a2Q3U962 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Col5a2Q3U962 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC27.28■■□□□ 1.96
Col5a2Q3U962 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC27.28■■□□□ 1.96
Col5a2Q3U962 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.28■■□□□ 1.96
Col5a2Q3U962 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Col5a2Q3U962 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC27.27■■□□□ 1.96
Col5a2Q3U962 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
Col5a2Q3U962 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Col5a2Q3U962 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Col5a2Q3U962 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col5a2Q3U962 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col5a2Q3U962 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col5a2Q3U962 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col5a2Q3U962 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Col5a2Q3U962 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col5a2Q3U962 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Col5a2Q3U962 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC27.24■■□□□ 1.95
Col5a2Q3U962 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC27.23■■□□□ 1.95
Col5a2Q3U962 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Col5a2Q3U962 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Col5a2Q3U962 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Col5a2Q3U962 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC27.22■■□□□ 1.95
Col5a2Q3U962 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Col5a2Q3U962 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Col5a2Q3U962 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Col5a2Q3U962 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.21■■□□□ 1.95
Col5a2Q3U962 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC27.21■■□□□ 1.95
Col5a2Q3U962 Etf1-202ENSMUST00000180351 108 ntBASIC27.21■■□□□ 1.95
Col5a2Q3U962 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Col5a2Q3U962 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Col5a2Q3U962 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC27.19■■□□□ 1.94
Col5a2Q3U962 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
Col5a2Q3U962 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Col5a2Q3U962 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Col5a2Q3U962 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col5a2Q3U962 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC27.19■■□□□ 1.94
Col5a2Q3U962 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Col5a2Q3U962 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Col5a2Q3U962 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC27.18■■□□□ 1.94
Col5a2Q3U962 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Col5a2Q3U962 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Col5a2Q3U962 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Col5a2Q3U962 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.17■■□□□ 1.94
Col5a2Q3U962 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Col5a2Q3U962 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Col5a2Q3U962 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
Col5a2Q3U962 Gm21956-201ENSMUST00000179946 522 ntBASIC27.14■■□□□ 1.94
Col5a2Q3U962 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Col5a2Q3U962 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Col5a2Q3U962 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.13■■□□□ 1.93
Col5a2Q3U962 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC27.13■■□□□ 1.93
Col5a2Q3U962 Gm13241-201ENSMUST00000094493 780 ntBASIC27.13■■□□□ 1.93
Col5a2Q3U962 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC27.12■■□□□ 1.93
Col5a2Q3U962 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Col5a2Q3U962 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Col5a2Q3U962 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
Col5a2Q3U962 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Col5a2Q3U962 Serp2-204ENSMUST00000228055 705 ntBASIC27.11■■□□□ 1.93
Col5a2Q3U962 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Col5a2Q3U962 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Col5a2Q3U962 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Col5a2Q3U962 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Col5a2Q3U962 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC27.1■■□□□ 1.93
Col5a2Q3U962 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Col5a2Q3U962 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Col5a2Q3U962 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Col5a2Q3U962 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Col5a2Q3U962 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC27.09■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms