Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Usp9xP70398 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp9xP70398 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp9xP70398 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp9xP70398 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp9xP70398 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp9xP70398 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp9xP70398 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.01■□□□□ 0.63
Usp9xP70398 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp9xP70398 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.99■□□□□ 0.63
Usp9xP70398 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp9xP70398 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.99■□□□□ 0.63
Usp9xP70398 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp9xP70398 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp9xP70398 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp9xP70398 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp9xP70398 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.97■□□□□ 0.63
Usp9xP70398 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp9xP70398 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Usp9xP70398 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp9xP70398 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp9xP70398 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Usp9xP70398 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.96■□□□□ 0.63
Usp9xP70398 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp9xP70398 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.95■□□□□ 0.62
Usp9xP70398 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp9xP70398 Gm9847-201ENSMUST00000052528 599 ntBASIC18.95■□□□□ 0.62
Usp9xP70398 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.95■□□□□ 0.62
Usp9xP70398 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp9xP70398 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp9xP70398 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp9xP70398 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp9xP70398 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp9xP70398 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.94■□□□□ 0.62
Usp9xP70398 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp9xP70398 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp9xP70398 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp9xP70398 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp9xP70398 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp9xP70398 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp9xP70398 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.92■□□□□ 0.62
Usp9xP70398 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp9xP70398 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp9xP70398 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp9xP70398 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Usp9xP70398 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp9xP70398 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.91■□□□□ 0.62
Usp9xP70398 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp9xP70398 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Usp9xP70398 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp9xP70398 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Usp9xP70398 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp9xP70398 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Usp9xP70398 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp9xP70398 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.91■□□□□ 0.62
Usp9xP70398 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp9xP70398 Gm7417-201ENSMUST00000192950 473 ntBASIC18.9■□□□□ 0.62
Usp9xP70398 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Usp9xP70398 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp9xP70398 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp9xP70398 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp9xP70398 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp9xP70398 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp9xP70398 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.89■□□□□ 0.61
Usp9xP70398 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Usp9xP70398 Gm12922-201ENSMUST00000120626 809 ntBASIC18.88■□□□□ 0.61
Usp9xP70398 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp9xP70398 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp9xP70398 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp9xP70398 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp9xP70398 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp9xP70398 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp9xP70398 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.87■□□□□ 0.61
Usp9xP70398 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Usp9xP70398 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp9xP70398 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.86■□□□□ 0.61
Usp9xP70398 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp9xP70398 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp9xP70398 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp9xP70398 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp9xP70398 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp9xP70398 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp9xP70398 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.85■□□□□ 0.61
Usp9xP70398 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.85■□□□□ 0.61
Usp9xP70398 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp9xP70398 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.84■□□□□ 0.61
Usp9xP70398 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.84■□□□□ 0.61
Usp9xP70398 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp9xP70398 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp9xP70398 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Usp9xP70398 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.83■□□□□ 0.6
Usp9xP70398 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp9xP70398 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Usp9xP70398 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.83■□□□□ 0.6
Usp9xP70398 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp9xP70398 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp9xP70398 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp9xP70398 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp9xP70398 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.82■□□□□ 0.6
Usp9xP70398 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms