Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Six5P70178 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.83■□□□□ 0.93
Six5P70178 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Six5P70178 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Six5P70178 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Six5P70178 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.83■□□□□ 0.92
Six5P70178 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Six5P70178 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Six5P70178 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Six5P70178 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six5P70178 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Six5P70178 Gm44428-201ENSMUST00000204474 874 ntBASIC20.82■□□□□ 0.92
Six5P70178 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six5P70178 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Six5P70178 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Six5P70178 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Six5P70178 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.81■□□□□ 0.92
Six5P70178 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.8■□□□□ 0.92
Six5P70178 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Six5P70178 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Six5P70178 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six5P70178 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Six5P70178 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six5P70178 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.79■□□□□ 0.92
Six5P70178 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six5P70178 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six5P70178 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Six5P70178 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six5P70178 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Six5P70178 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Six5P70178 Gm11175-201ENSMUST00000116172 543 ntBASIC20.77■□□□□ 0.92
Six5P70178 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.77■□□□□ 0.92
Six5P70178 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
Six5P70178 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Six5P70178 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Six5P70178 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six5P70178 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six5P70178 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six5P70178 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Six5P70178 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six5P70178 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.76■□□□□ 0.91
Six5P70178 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Six5P70178 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.75■□□□□ 0.91
Six5P70178 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six5P70178 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Six5P70178 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six5P70178 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six5P70178 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six5P70178 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six5P70178 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six5P70178 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six5P70178 Mir6538-201ENSMUST00000183713 110 ntBASIC20.74■□□□□ 0.91
Six5P70178 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six5P70178 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Six5P70178 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six5P70178 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six5P70178 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six5P70178 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.73■□□□□ 0.91
Six5P70178 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six5P70178 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six5P70178 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six5P70178 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six5P70178 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.72■□□□□ 0.91
Six5P70178 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six5P70178 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Six5P70178 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Six5P70178 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six5P70178 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six5P70178 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.71■□□□□ 0.91
Six5P70178 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.71■□□□□ 0.91
Six5P70178 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six5P70178 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Six5P70178 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Six5P70178 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Six5P70178 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Six5P70178 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Six5P70178 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Six5P70178 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Six5P70178 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Six5P70178 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six5P70178 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Six5P70178 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Six5P70178 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Six5P70178 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six5P70178 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Six5P70178 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six5P70178 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six5P70178 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six5P70178 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.66■□□□□ 0.9
Six5P70178 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six5P70178 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six5P70178 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six5P70178 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Six5P70178 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Six5P70178 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.64■□□□□ 0.9
Six5P70178 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six5P70178 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six5P70178 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six5P70178 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six5P70178 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms