Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx4P53776 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.69■□□□□ 0.58
Lhx4P53776 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx4P53776 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx4P53776 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx4P53776 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx4P53776 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Lhx4P53776 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx4P53776 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Lhx4P53776 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.68■□□□□ 0.58
Lhx4P53776 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.68■□□□□ 0.58
Lhx4P53776 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx4P53776 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lhx4P53776 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx4P53776 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx4P53776 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Lhx4P53776 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx4P53776 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx4P53776 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx4P53776 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lhx4P53776 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx4P53776 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.66■□□□□ 0.58
Lhx4P53776 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx4P53776 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx4P53776 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx4P53776 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Lhx4P53776 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx4P53776 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.64■□□□□ 0.57
Lhx4P53776 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx4P53776 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx4P53776 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx4P53776 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lhx4P53776 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx4P53776 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lhx4P53776 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx4P53776 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx4P53776 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Lhx4P53776 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx4P53776 Gm9812-201ENSMUST00000061934 968 ntBASIC18.62■□□□□ 0.57
Lhx4P53776 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx4P53776 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx4P53776 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Lhx4P53776 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx4P53776 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx4P53776 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx4P53776 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx4P53776 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Lhx4P53776 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx4P53776 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.6■□□□□ 0.57
Lhx4P53776 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lhx4P53776 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx4P53776 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.6■□□□□ 0.57
Lhx4P53776 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx4P53776 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx4P53776 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx4P53776 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx4P53776 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx4P53776 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.59■□□□□ 0.57
Lhx4P53776 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Lhx4P53776 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Lhx4P53776 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx4P53776 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx4P53776 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.58■□□□□ 0.57
Lhx4P53776 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Lhx4P53776 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx4P53776 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx4P53776 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Lhx4P53776 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx4P53776 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx4P53776 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lhx4P53776 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.57■□□□□ 0.56
Lhx4P53776 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx4P53776 Cap2-205ENSMUST00000225824 1634 ntBASIC18.57■□□□□ 0.56
Lhx4P53776 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx4P53776 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx4P53776 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lhx4P53776 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx4P53776 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.56■□□□□ 0.56
Lhx4P53776 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.56■□□□□ 0.56
Lhx4P53776 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lhx4P53776 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lhx4P53776 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lhx4P53776 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.56■□□□□ 0.56
Lhx4P53776 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lhx4P53776 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx4P53776 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.55■□□□□ 0.56
Lhx4P53776 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx4P53776 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lhx4P53776 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx4P53776 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Lhx4P53776 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx4P53776 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx4P53776 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx4P53776 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx4P53776 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx4P53776 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx4P53776 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Lhx4P53776 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx4P53776 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx4P53776 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms