Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rfx3P48381 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx3P48381 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.03■□□□□ 0.8
Rfx3P48381 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rfx3P48381 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx3P48381 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.03■□□□□ 0.8
Rfx3P48381 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx3P48381 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rfx3P48381 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx3P48381 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx3P48381 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx3P48381 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx3P48381 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rfx3P48381 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rfx3P48381 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx3P48381 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx3P48381 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.02■□□□□ 0.79
Rfx3P48381 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.02■□□□□ 0.79
Rfx3P48381 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rfx3P48381 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx3P48381 Gm4799-201ENSMUST00000095396 657 ntBASIC20.01■□□□□ 0.79
Rfx3P48381 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx3P48381 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfx3P48381 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx3P48381 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx3P48381 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
Rfx3P48381 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx3P48381 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.99■□□□□ 0.79
Rfx3P48381 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx3P48381 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rfx3P48381 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx3P48381 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx3P48381 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx3P48381 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx3P48381 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.98■□□□□ 0.79
Rfx3P48381 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
Rfx3P48381 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.98■□□□□ 0.79
Rfx3P48381 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx3P48381 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx3P48381 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx3P48381 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rfx3P48381 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx3P48381 Gm11599-201ENSMUST00000118720 878 ntBASIC19.97■□□□□ 0.79
Rfx3P48381 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx3P48381 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx3P48381 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx3P48381 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx3P48381 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx3P48381 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx3P48381 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.96■□□□□ 0.79
Rfx3P48381 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.96■□□□□ 0.79
Rfx3P48381 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Rfx3P48381 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx3P48381 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.95■□□□□ 0.78
Rfx3P48381 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rfx3P48381 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx3P48381 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx3P48381 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.95■□□□□ 0.78
Rfx3P48381 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx3P48381 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx3P48381 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.95■□□□□ 0.78
Rfx3P48381 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx3P48381 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx3P48381 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.94■□□□□ 0.78
Rfx3P48381 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rfx3P48381 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx3P48381 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx3P48381 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx3P48381 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx3P48381 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx3P48381 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx3P48381 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx3P48381 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.92■□□□□ 0.78
Rfx3P48381 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx3P48381 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx3P48381 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx3P48381 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx3P48381 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx3P48381 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx3P48381 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx3P48381 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx3P48381 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx3P48381 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx3P48381 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx3P48381 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
Rfx3P48381 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx3P48381 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx3P48381 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx3P48381 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx3P48381 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx3P48381 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx3P48381 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rfx3P48381 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Rfx3P48381 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Rfx3P48381 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx3P48381 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx3P48381 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Rfx3P48381 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx3P48381 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx3P48381 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms