Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
Sox18P43680 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Sox18P43680 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox18P43680 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.52■■□□□ 1.04
Sox18P43680 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.52■■□□□ 1.04
Sox18P43680 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox18P43680 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sox18P43680 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sox18P43680 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.51■■□□□ 1.03
Sox18P43680 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox18P43680 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.51■■□□□ 1.03
Sox18P43680 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox18P43680 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Sox18P43680 Gm10232-201ENSMUST00000089221 720 ntBASIC21.51■■□□□ 1.03
Sox18P43680 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox18P43680 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sox18P43680 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox18P43680 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.5■■□□□ 1.03
Sox18P43680 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Sox18P43680 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox18P43680 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox18P43680 Gm13241-201ENSMUST00000094493 780 ntBASIC21.49■■□□□ 1.03
Sox18P43680 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox18P43680 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox18P43680 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sox18P43680 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Sox18P43680 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sox18P43680 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sox18P43680 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox18P43680 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Sox18P43680 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.47■■□□□ 1.03
Sox18P43680 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.47■■□□□ 1.03
Sox18P43680 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox18P43680 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox18P43680 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.46■■□□□ 1.03
Sox18P43680 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Sox18P43680 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sox18P43680 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sox18P43680 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Sox18P43680 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Sox18P43680 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.45■■□□□ 1.02
Sox18P43680 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox18P43680 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox18P43680 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox18P43680 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sox18P43680 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox18P43680 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox18P43680 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Sox18P43680 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox18P43680 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox18P43680 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox18P43680 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.43■■□□□ 1.02
Sox18P43680 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Sox18P43680 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox18P43680 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox18P43680 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Sox18P43680 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.42■■□□□ 1.02
Sox18P43680 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox18P43680 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox18P43680 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sox18P43680 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox18P43680 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Sox18P43680 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.41■■□□□ 1.02
Sox18P43680 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox18P43680 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.4■■□□□ 1.02
Sox18P43680 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox18P43680 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox18P43680 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox18P43680 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sox18P43680 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.39■■□□□ 1.01
Sox18P43680 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.39■■□□□ 1.01
Sox18P43680 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sox18P43680 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox18P43680 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sox18P43680 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox18P43680 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox18P43680 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.38■■□□□ 1.01
Sox18P43680 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.38■■□□□ 1.01
Sox18P43680 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sox18P43680 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox18P43680 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox18P43680 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Sox18P43680 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sox18P43680 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sox18P43680 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox18P43680 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
Sox18P43680 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox18P43680 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox18P43680 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.36■■□□□ 1.01
Sox18P43680 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.36■■□□□ 1.01
Sox18P43680 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox18P43680 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sox18P43680 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.35■■□□□ 1.01
Sox18P43680 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox18P43680 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sox18P43680 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox18P43680 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Sox18P43680 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sox18P43680 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sox18P43680 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms