Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TP20293 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TP20293 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TP20293 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.8■□□□□ 0.92
TP20293 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TP20293 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TP20293 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TP20293 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TP20293 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TP20293 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TP20293 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TP20293 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TP20293 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TP20293 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TP20293 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.78■□□□□ 0.92
TP20293 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TP20293 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TP20293 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TP20293 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TP20293 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TP20293 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TP20293 Scarna2-201ENSMUST00000157560 414 ntBASIC20.77■□□□□ 0.92
TP20293 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TP20293 Gm9806-201ENSMUST00000051080 552 ntBASIC20.77■□□□□ 0.92
TP20293 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TP20293 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TP20293 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TP20293 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TP20293 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TP20293 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TP20293 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.76■□□□□ 0.91
TP20293 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.76■□□□□ 0.91
TP20293 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.75■□□□□ 0.91
TP20293 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TP20293 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TP20293 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
TP20293 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TP20293 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TP20293 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TP20293 Gm11175-201ENSMUST00000116172 543 ntBASIC20.74■□□□□ 0.91
TP20293 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TP20293 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TP20293 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TP20293 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TP20293 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TP20293 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TP20293 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TP20293 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TP20293 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TP20293 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TP20293 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TP20293 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TP20293 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TP20293 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TP20293 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TP20293 Gm16437-201ENSMUST00000025669 507 ntBASIC20.71■□□□□ 0.91
TP20293 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TP20293 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TP20293 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TP20293 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.71■□□□□ 0.91
TP20293 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TP20293 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TP20293 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TP20293 Gm11687-201ENSMUST00000118911 886 ntBASIC20.7■□□□□ 0.9
TP20293 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TP20293 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TP20293 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TP20293 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TP20293 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TP20293 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
TP20293 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TP20293 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TP20293 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.69■□□□□ 0.9
TP20293 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TP20293 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
TP20293 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.69■□□□□ 0.9
TP20293 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TP20293 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TP20293 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TP20293 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TP20293 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TP20293 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TP20293 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TP20293 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TP20293 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TP20293 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.67■□□□□ 0.9
TP20293 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TP20293 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TP20293 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TP20293 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TP20293 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TP20293 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TP20293 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.67■□□□□ 0.9
TP20293 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TP20293 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TP20293 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TP20293 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TP20293 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TP20293 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TP20293 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms