Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf17O88472 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.14■□□□□ 0.97
Tnfrsf17O88472 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf17O88472 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf17O88472 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf17O88472 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Tnfrsf17O88472 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf17O88472 Gm7417-201ENSMUST00000192950 473 ntBASIC21.12■□□□□ 0.97
Tnfrsf17O88472 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.12■□□□□ 0.97
Tnfrsf17O88472 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.12■□□□□ 0.97
Tnfrsf17O88472 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf17O88472 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf17O88472 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.11■□□□□ 0.97
Tnfrsf17O88472 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf17O88472 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf17O88472 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.1■□□□□ 0.97
Tnfrsf17O88472 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf17O88472 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf17O88472 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.09■□□□□ 0.97
Tnfrsf17O88472 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Tnfrsf17O88472 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf17O88472 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf17O88472 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf17O88472 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf17O88472 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Tnfrsf17O88472 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.07■□□□□ 0.96
Tnfrsf17O88472 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf17O88472 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.07■□□□□ 0.96
Tnfrsf17O88472 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf17O88472 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf17O88472 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Tnfrsf17O88472 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.06■□□□□ 0.96
Tnfrsf17O88472 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Tnfrsf17O88472 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf17O88472 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf17O88472 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Tnfrsf17O88472 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.05■□□□□ 0.96
Tnfrsf17O88472 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf17O88472 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tnfrsf17O88472 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf17O88472 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf17O88472 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf17O88472 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Tnfrsf17O88472 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf17O88472 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.03■□□□□ 0.96
Tnfrsf17O88472 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf17O88472 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.03■□□□□ 0.96
Tnfrsf17O88472 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.03■□□□□ 0.96
Tnfrsf17O88472 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.03■□□□□ 0.96
Tnfrsf17O88472 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf17O88472 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf17O88472 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf17O88472 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf17O88472 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf17O88472 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf17O88472 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tnfrsf17O88472 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Tnfrsf17O88472 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.02■□□□□ 0.96
Tnfrsf17O88472 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Tnfrsf17O88472 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.01■□□□□ 0.95
Tnfrsf17O88472 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf17O88472 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf17O88472 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.01■□□□□ 0.95
Tnfrsf17O88472 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf17O88472 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf17O88472 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf17O88472 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf17O88472 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf17O88472 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf17O88472 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.99■□□□□ 0.95
Tnfrsf17O88472 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf17O88472 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf17O88472 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf17O88472 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf17O88472 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf17O88472 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tnfrsf17O88472 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.98■□□□□ 0.95
Tnfrsf17O88472 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf17O88472 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf17O88472 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf17O88472 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.97■□□□□ 0.95
Tnfrsf17O88472 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf17O88472 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf17O88472 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.96■□□□□ 0.95
Tnfrsf17O88472 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf17O88472 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf17O88472 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
Tnfrsf17O88472 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf17O88472 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf17O88472 Gm22238-201ENSMUST00000175222 88 ntBASIC20.95■□□□□ 0.94
Tnfrsf17O88472 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf17O88472 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf17O88472 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.95■□□□□ 0.94
Tnfrsf17O88472 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfrsf17O88472 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.94■□□□□ 0.94
Tnfrsf17O88472 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfrsf17O88472 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfrsf17O88472 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Tnfrsf17O88472 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfrsf17O88472 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms