Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.51■□□□□ 0.87
Capns1O88456 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.51■□□□□ 0.87
Capns1O88456 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capns1O88456 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Capns1O88456 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Capns1O88456 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.5■□□□□ 0.87
Capns1O88456 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capns1O88456 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capns1O88456 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capns1O88456 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Capns1O88456 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.5■□□□□ 0.87
Capns1O88456 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capns1O88456 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capns1O88456 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capns1O88456 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Capns1O88456 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capns1O88456 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capns1O88456 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capns1O88456 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capns1O88456 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Capns1O88456 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Capns1O88456 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Capns1O88456 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Capns1O88456 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Capns1O88456 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Capns1O88456 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Capns1O88456 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Capns1O88456 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Capns1O88456 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capns1O88456 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capns1O88456 Gm11175-201ENSMUST00000116172 543 ntBASIC20.47■□□□□ 0.87
Capns1O88456 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Capns1O88456 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Capns1O88456 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capns1O88456 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capns1O88456 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Capns1O88456 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Capns1O88456 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Capns1O88456 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.46■□□□□ 0.87
Capns1O88456 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Capns1O88456 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.45■□□□□ 0.86
Capns1O88456 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capns1O88456 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capns1O88456 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Capns1O88456 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capns1O88456 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capns1O88456 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Capns1O88456 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Capns1O88456 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Capns1O88456 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capns1O88456 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Capns1O88456 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Capns1O88456 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Capns1O88456 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Capns1O88456 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Capns1O88456 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Capns1O88456 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Capns1O88456 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Capns1O88456 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Capns1O88456 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.42■□□□□ 0.86
Capns1O88456 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Capns1O88456 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Capns1O88456 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Capns1O88456 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Capns1O88456 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.41■□□□□ 0.86
Capns1O88456 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Capns1O88456 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.4■□□□□ 0.86
Capns1O88456 Cap2-205ENSMUST00000225824 1634 ntBASIC20.4■□□□□ 0.86
Capns1O88456 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Capns1O88456 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Capns1O88456 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Capns1O88456 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Capns1O88456 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Capns1O88456 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Capns1O88456 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Capns1O88456 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Capns1O88456 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Capns1O88456 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Capns1O88456 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Capns1O88456 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Capns1O88456 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Capns1O88456 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Capns1O88456 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Capns1O88456 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Capns1O88456 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Capns1O88456 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Capns1O88456 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Capns1O88456 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Capns1O88456 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
Capns1O88456 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.35■□□□□ 0.85
Capns1O88456 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Capns1O88456 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.35■□□□□ 0.85
Capns1O88456 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Capns1O88456 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Capns1O88456 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.35■□□□□ 0.85
Capns1O88456 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Capns1O88456 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Capns1O88456 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Capns1O88456 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Capns1O88456 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms