Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh12O55134 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdh12O55134 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdh12O55134 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh12O55134 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pcdh12O55134 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh12O55134 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh12O55134 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh12O55134 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh12O55134 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdh12O55134 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh12O55134 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh12O55134 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh12O55134 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdh12O55134 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh12O55134 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh12O55134 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh12O55134 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pcdh12O55134 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Pcdh12O55134 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdh12O55134 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh12O55134 Terc-201ENSMUST00000082862 423 ntBASIC20.1■□□□□ 0.81
Pcdh12O55134 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Pcdh12O55134 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh12O55134 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdh12O55134 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdh12O55134 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.09■□□□□ 0.81
Pcdh12O55134 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdh12O55134 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh12O55134 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh12O55134 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh12O55134 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh12O55134 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh12O55134 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh12O55134 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh12O55134 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Pcdh12O55134 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdh12O55134 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh12O55134 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh12O55134 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdh12O55134 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh12O55134 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh12O55134 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh12O55134 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.06■□□□□ 0.8
Pcdh12O55134 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh12O55134 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh12O55134 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh12O55134 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh12O55134 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh12O55134 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdh12O55134 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh12O55134 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh12O55134 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh12O55134 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh12O55134 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh12O55134 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh12O55134 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh12O55134 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdh12O55134 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh12O55134 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdh12O55134 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdh12O55134 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh12O55134 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh12O55134 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdh12O55134 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh12O55134 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh12O55134 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh12O55134 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh12O55134 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh12O55134 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh12O55134 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh12O55134 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.02■□□□□ 0.79
Pcdh12O55134 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh12O55134 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh12O55134 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdh12O55134 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh12O55134 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdh12O55134 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh12O55134 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh12O55134 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh12O55134 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdh12O55134 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh12O55134 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20■□□□□ 0.79
Pcdh12O55134 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh12O55134 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh12O55134 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh12O55134 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh12O55134 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdh12O55134 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Pcdh12O55134 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh12O55134 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdh12O55134 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh12O55134 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh12O55134 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh12O55134 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh12O55134 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdh12O55134 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh12O55134 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh12O55134 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh12O55134 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms