Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.98■■□□□ 1.11
Slc1a6O35544 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.98■■□□□ 1.11
Slc1a6O35544 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.98■■□□□ 1.11
Slc1a6O35544 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc1a6O35544 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc1a6O35544 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Slc1a6O35544 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc1a6O35544 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc1a6O35544 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc1a6O35544 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Slc1a6O35544 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.97■■□□□ 1.11
Slc1a6O35544 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc1a6O35544 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Slc1a6O35544 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Slc1a6O35544 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.96■■□□□ 1.11
Slc1a6O35544 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Slc1a6O35544 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Slc1a6O35544 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Slc1a6O35544 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Slc1a6O35544 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Slc1a6O35544 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.95■■□□□ 1.1
Slc1a6O35544 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Slc1a6O35544 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.95■■□□□ 1.1
Slc1a6O35544 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.95■■□□□ 1.1
Slc1a6O35544 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Slc1a6O35544 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.95■■□□□ 1.1
Slc1a6O35544 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Slc1a6O35544 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Slc1a6O35544 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc1a6O35544 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc1a6O35544 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc1a6O35544 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Slc1a6O35544 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc1a6O35544 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Slc1a6O35544 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc1a6O35544 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Slc1a6O35544 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc1a6O35544 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Slc1a6O35544 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc1a6O35544 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc1a6O35544 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc1a6O35544 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc1a6O35544 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc1a6O35544 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc1a6O35544 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc1a6O35544 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.9■■□□□ 1.1
Slc1a6O35544 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Slc1a6O35544 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc1a6O35544 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Slc1a6O35544 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc1a6O35544 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Slc1a6O35544 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Slc1a6O35544 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Slc1a6O35544 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc1a6O35544 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc1a6O35544 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.88■■□□□ 1.09
Slc1a6O35544 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc1a6O35544 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc1a6O35544 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc1a6O35544 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Slc1a6O35544 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.87■■□□□ 1.09
Slc1a6O35544 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc1a6O35544 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Slc1a6O35544 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc1a6O35544 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.86■■□□□ 1.09
Slc1a6O35544 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Slc1a6O35544 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.85■■□□□ 1.09
Slc1a6O35544 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc1a6O35544 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc1a6O35544 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc1a6O35544 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Slc1a6O35544 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.83■■□□□ 1.09
Slc1a6O35544 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc1a6O35544 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.83■■□□□ 1.09
Slc1a6O35544 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc1a6O35544 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Slc1a6O35544 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Slc1a6O35544 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Slc1a6O35544 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.82■■□□□ 1.08
Slc1a6O35544 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc1a6O35544 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc1a6O35544 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.81■■□□□ 1.08
Slc1a6O35544 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.81■■□□□ 1.08
Slc1a6O35544 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc1a6O35544 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc1a6O35544 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.8■■□□□ 1.08
Slc1a6O35544 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc1a6O35544 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Slc1a6O35544 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Slc1a6O35544 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc1a6O35544 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc1a6O35544 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Slc1a6O35544 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slc1a6O35544 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc1a6O35544 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc1a6O35544 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slc1a6O35544 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc1a6O35544 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc1a6O35544 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc1a6O35544 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms