Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Gfra3O35118 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Gfra3O35118 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Gfra3O35118 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gfra3O35118 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gfra3O35118 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.26■□□□□ 0.67
Gfra3O35118 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfra3O35118 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gfra3O35118 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfra3O35118 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.25■□□□□ 0.67
Gfra3O35118 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfra3O35118 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gfra3O35118 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.24■□□□□ 0.67
Gfra3O35118 Gm10420-201ENSMUST00000121713 882 ntBASIC19.24■□□□□ 0.67
Gfra3O35118 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gfra3O35118 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gfra3O35118 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.23■□□□□ 0.67
Gfra3O35118 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gfra3O35118 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.23■□□□□ 0.67
Gfra3O35118 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.23■□□□□ 0.67
Gfra3O35118 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gfra3O35118 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gfra3O35118 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gfra3O35118 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Gfra3O35118 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfra3O35118 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.22■□□□□ 0.67
Gfra3O35118 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gfra3O35118 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gfra3O35118 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfra3O35118 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfra3O35118 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gfra3O35118 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfra3O35118 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra3O35118 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra3O35118 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra3O35118 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra3O35118 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra3O35118 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra3O35118 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra3O35118 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra3O35118 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Gfra3O35118 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra3O35118 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra3O35118 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra3O35118 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra3O35118 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra3O35118 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra3O35118 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.19■□□□□ 0.66
Gfra3O35118 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.19■□□□□ 0.66
Gfra3O35118 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra3O35118 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra3O35118 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra3O35118 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra3O35118 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra3O35118 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gfra3O35118 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gfra3O35118 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Gfra3O35118 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.17■□□□□ 0.66
Gfra3O35118 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gfra3O35118 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gfra3O35118 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gfra3O35118 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gfra3O35118 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gfra3O35118 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gfra3O35118 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gfra3O35118 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gfra3O35118 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gfra3O35118 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gfra3O35118 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.15■□□□□ 0.66
Gfra3O35118 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gfra3O35118 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gfra3O35118 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Gfra3O35118 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gfra3O35118 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gfra3O35118 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gfra3O35118 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gfra3O35118 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gfra3O35118 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gfra3O35118 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gfra3O35118 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gfra3O35118 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gfra3O35118 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gfra3O35118 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.12■□□□□ 0.65
Gfra3O35118 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gfra3O35118 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gfra3O35118 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Gfra3O35118 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gfra3O35118 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Gfra3O35118 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gfra3O35118 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Gfra3O35118 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gfra3O35118 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gfra3O35118 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gfra3O35118 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.11■□□□□ 0.65
Gfra3O35118 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gfra3O35118 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Gfra3O35118 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gfra3O35118 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.1■□□□□ 0.65
Gfra3O35118 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gfra3O35118 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms