Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdhr4H3BJZ2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdhr4H3BJZ2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.69■□□□□ 0.74
Cdhr4H3BJZ2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdhr4H3BJZ2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdhr4H3BJZ2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdhr4H3BJZ2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cdhr4H3BJZ2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdhr4H3BJZ2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cdhr4H3BJZ2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdhr4H3BJZ2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdhr4H3BJZ2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdhr4H3BJZ2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdhr4H3BJZ2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdhr4H3BJZ2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdhr4H3BJZ2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdhr4H3BJZ2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdhr4H3BJZ2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.66■□□□□ 0.74
Cdhr4H3BJZ2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdhr4H3BJZ2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdhr4H3BJZ2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdhr4H3BJZ2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdhr4H3BJZ2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdhr4H3BJZ2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdhr4H3BJZ2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.64■□□□□ 0.73
Cdhr4H3BJZ2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cdhr4H3BJZ2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr4H3BJZ2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr4H3BJZ2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr4H3BJZ2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr4H3BJZ2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr4H3BJZ2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cdhr4H3BJZ2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdhr4H3BJZ2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdhr4H3BJZ2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.62■□□□□ 0.73
Cdhr4H3BJZ2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdhr4H3BJZ2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdhr4H3BJZ2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdhr4H3BJZ2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdhr4H3BJZ2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdhr4H3BJZ2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdhr4H3BJZ2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdhr4H3BJZ2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cdhr4H3BJZ2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Cdhr4H3BJZ2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdhr4H3BJZ2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr4H3BJZ2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr4H3BJZ2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr4H3BJZ2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr4H3BJZ2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr4H3BJZ2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr4H3BJZ2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr4H3BJZ2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr4H3BJZ2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr4H3BJZ2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdhr4H3BJZ2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Cdhr4H3BJZ2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdhr4H3BJZ2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdhr4H3BJZ2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdhr4H3BJZ2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdhr4H3BJZ2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdhr4H3BJZ2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdhr4H3BJZ2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdhr4H3BJZ2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdhr4H3BJZ2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cdhr4H3BJZ2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdhr4H3BJZ2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdhr4H3BJZ2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.56■□□□□ 0.72
Cdhr4H3BJZ2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdhr4H3BJZ2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cdhr4H3BJZ2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cdhr4H3BJZ2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr4H3BJZ2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cdhr4H3BJZ2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr4H3BJZ2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.55■□□□□ 0.72
Cdhr4H3BJZ2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cdhr4H3BJZ2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr4H3BJZ2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr4H3BJZ2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr4H3BJZ2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cdhr4H3BJZ2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.53■□□□□ 0.72
Cdhr4H3BJZ2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr4H3BJZ2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr4H3BJZ2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cdhr4H3BJZ2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cdhr4H3BJZ2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdhr4H3BJZ2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdhr4H3BJZ2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr4H3BJZ2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr4H3BJZ2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr4H3BJZ2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.51■□□□□ 0.71
Cdhr4H3BJZ2 Gm5921-201ENSMUST00000075898 882 ntBASIC19.51■□□□□ 0.71
Cdhr4H3BJZ2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Cdhr4H3BJZ2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cdhr4H3BJZ2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr4H3BJZ2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr4H3BJZ2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr4H3BJZ2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr4H3BJZ2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdhr4H3BJZ2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms