Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
Tubgcp6G5E8P0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Tubgcp6G5E8P0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Tubgcp6G5E8P0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC32.03■■■□□ 2.72
Tubgcp6G5E8P0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
Tubgcp6G5E8P0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Tubgcp6G5E8P0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Tubgcp6G5E8P0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Tubgcp6G5E8P0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Tubgcp6G5E8P0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC32.02■■■□□ 2.72
Tubgcp6G5E8P0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Tubgcp6G5E8P0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Tubgcp6G5E8P0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
Tubgcp6G5E8P0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Tubgcp6G5E8P0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Tubgcp6G5E8P0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC31.99■■■□□ 2.71
Tubgcp6G5E8P0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Tubgcp6G5E8P0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Tubgcp6G5E8P0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
Tubgcp6G5E8P0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
Tubgcp6G5E8P0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
Tubgcp6G5E8P0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC31.96■■■□□ 2.71
Tubgcp6G5E8P0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Tubgcp6G5E8P0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
Tubgcp6G5E8P0 Gm5297-201ENSMUST00000198555 1171 ntBASIC31.94■■■□□ 2.7
Tubgcp6G5E8P0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Tubgcp6G5E8P0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Tubgcp6G5E8P0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Tubgcp6G5E8P0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Tubgcp6G5E8P0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Tubgcp6G5E8P0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC31.93■■■□□ 2.7
Tubgcp6G5E8P0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC31.93■■■□□ 2.7
Tubgcp6G5E8P0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC31.92■■■□□ 2.7
Tubgcp6G5E8P0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC31.92■■■□□ 2.7
Tubgcp6G5E8P0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC31.91■■■□□ 2.7
Tubgcp6G5E8P0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
Tubgcp6G5E8P0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Tubgcp6G5E8P0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC31.9■■■□□ 2.7
Tubgcp6G5E8P0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Tubgcp6G5E8P0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
Tubgcp6G5E8P0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
Tubgcp6G5E8P0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Tubgcp6G5E8P0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Tubgcp6G5E8P0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Tubgcp6G5E8P0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Tubgcp6G5E8P0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Tubgcp6G5E8P0 Gm37847-201ENSMUST00000192163 1497 ntBASIC31.85■■■□□ 2.69
Tubgcp6G5E8P0 Gm31748-201ENSMUST00000194938 1497 ntBASIC31.85■■■□□ 2.69
Tubgcp6G5E8P0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Tubgcp6G5E8P0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC31.84■■■□□ 2.69
Tubgcp6G5E8P0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Tubgcp6G5E8P0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC31.84■■■□□ 2.69
Tubgcp6G5E8P0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Tubgcp6G5E8P0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC31.84■■■□□ 2.69
Tubgcp6G5E8P0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
Tubgcp6G5E8P0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC31.84■■■□□ 2.69
Tubgcp6G5E8P0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Tubgcp6G5E8P0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Tubgcp6G5E8P0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC31.83■■■□□ 2.69
Tubgcp6G5E8P0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Tubgcp6G5E8P0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Tubgcp6G5E8P0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC31.82■■■□□ 2.68
Tubgcp6G5E8P0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Tubgcp6G5E8P0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Tubgcp6G5E8P0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Tubgcp6G5E8P0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC31.81■■■□□ 2.68
Tubgcp6G5E8P0 Gm10232-201ENSMUST00000089221 720 ntBASIC31.81■■■□□ 2.68
Tubgcp6G5E8P0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Tubgcp6G5E8P0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC31.81■■■□□ 2.68
Tubgcp6G5E8P0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Tubgcp6G5E8P0 Gm21956-201ENSMUST00000179946 522 ntBASIC31.8■■■□□ 2.68
Tubgcp6G5E8P0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Tubgcp6G5E8P0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Tubgcp6G5E8P0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Tubgcp6G5E8P0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
Tubgcp6G5E8P0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC31.79■■■□□ 2.68
Tubgcp6G5E8P0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Tubgcp6G5E8P0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tubgcp6G5E8P0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Tubgcp6G5E8P0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tubgcp6G5E8P0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Tubgcp6G5E8P0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Tubgcp6G5E8P0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Tubgcp6G5E8P0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Tubgcp6G5E8P0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Tubgcp6G5E8P0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
Tubgcp6G5E8P0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Tubgcp6G5E8P0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC31.76■■■□□ 2.67
Tubgcp6G5E8P0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Tubgcp6G5E8P0 Gm5131-201ENSMUST00000212776 1238 ntBASIC31.75■■■□□ 2.67
Tubgcp6G5E8P0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC31.74■■■□□ 2.67
Tubgcp6G5E8P0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Tubgcp6G5E8P0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Tubgcp6G5E8P0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC31.73■■■□□ 2.67
Tubgcp6G5E8P0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Tubgcp6G5E8P0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Tubgcp6G5E8P0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC31.72■■■□□ 2.67
Tubgcp6G5E8P0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Tubgcp6G5E8P0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
Tubgcp6G5E8P0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms