Protein–RNA interactions for Protein: F6V5V4

Gm11397, Predicted gene 11397, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11397F6V5V4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
Gm11397F6V5V4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11397F6V5V4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11397F6V5V4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11397F6V5V4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11397F6V5V4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Gm11397F6V5V4 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.54■□□□□ 0.88
Gm11397F6V5V4 Gm9812-201ENSMUST00000061934 968 ntBASIC20.54■□□□□ 0.88
Gm11397F6V5V4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gm11397F6V5V4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11397F6V5V4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11397F6V5V4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gm11397F6V5V4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11397F6V5V4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11397F6V5V4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11397F6V5V4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm11397F6V5V4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm11397F6V5V4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm11397F6V5V4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Gm11397F6V5V4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm11397F6V5V4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.51■□□□□ 0.87
Gm11397F6V5V4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm11397F6V5V4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm11397F6V5V4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Gm11397F6V5V4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm11397F6V5V4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm11397F6V5V4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm11397F6V5V4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm11397F6V5V4 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.5■□□□□ 0.87
Gm11397F6V5V4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Gm11397F6V5V4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Gm11397F6V5V4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm11397F6V5V4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm11397F6V5V4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm11397F6V5V4 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.5■□□□□ 0.87
Gm11397F6V5V4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm11397F6V5V4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm11397F6V5V4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm11397F6V5V4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm11397F6V5V4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm11397F6V5V4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Gm11397F6V5V4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm11397F6V5V4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm11397F6V5V4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm11397F6V5V4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.47■□□□□ 0.87
Gm11397F6V5V4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Gm11397F6V5V4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm11397F6V5V4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm11397F6V5V4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm11397F6V5V4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm11397F6V5V4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm11397F6V5V4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Gm11397F6V5V4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Gm11397F6V5V4 Gm45364-201ENSMUST00000210883 159 ntBASIC20.45■□□□□ 0.86
Gm11397F6V5V4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.45■□□□□ 0.86
Gm11397F6V5V4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.45■□□□□ 0.86
Gm11397F6V5V4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.44■□□□□ 0.86
Gm11397F6V5V4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11397F6V5V4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11397F6V5V4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.44■□□□□ 0.86
Gm11397F6V5V4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11397F6V5V4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11397F6V5V4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Gm11397F6V5V4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Gm11397F6V5V4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm11397F6V5V4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm11397F6V5V4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.43■□□□□ 0.86
Gm11397F6V5V4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm11397F6V5V4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11397F6V5V4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11397F6V5V4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11397F6V5V4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11397F6V5V4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Gm11397F6V5V4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11397F6V5V4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11397F6V5V4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11397F6V5V4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11397F6V5V4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11397F6V5V4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11397F6V5V4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.41■□□□□ 0.86
Gm11397F6V5V4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11397F6V5V4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11397F6V5V4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11397F6V5V4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Gm11397F6V5V4 Terc-201ENSMUST00000082862 423 ntBASIC20.4■□□□□ 0.86
Gm11397F6V5V4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.39■□□□□ 0.85
Gm11397F6V5V4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11397F6V5V4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11397F6V5V4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11397F6V5V4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11397F6V5V4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11397F6V5V4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11397F6V5V4 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.38■□□□□ 0.85
Gm11397F6V5V4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11397F6V5V4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm11397F6V5V4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.37■□□□□ 0.85
Gm11397F6V5V4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm11397F6V5V4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Gm11397F6V5V4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.37■□□□□ 0.85
Gm11397F6V5V4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms