Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Hfm1D3Z4R1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC32.46■■■□□ 2.79
Hfm1D3Z4R1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC32.46■■■□□ 2.79
Hfm1D3Z4R1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Hfm1D3Z4R1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Hfm1D3Z4R1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
Hfm1D3Z4R1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC32.45■■■□□ 2.79
Hfm1D3Z4R1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC32.45■■■□□ 2.78
Hfm1D3Z4R1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
Hfm1D3Z4R1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Hfm1D3Z4R1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Hfm1D3Z4R1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Hfm1D3Z4R1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Hfm1D3Z4R1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Hfm1D3Z4R1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Hfm1D3Z4R1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Hfm1D3Z4R1 Gm10232-201ENSMUST00000089221 720 ntBASIC32.43■■■□□ 2.78
Hfm1D3Z4R1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Hfm1D3Z4R1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Hfm1D3Z4R1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC32.41■■■□□ 2.78
Hfm1D3Z4R1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Hfm1D3Z4R1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Hfm1D3Z4R1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Hfm1D3Z4R1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
Hfm1D3Z4R1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC32.4■■■□□ 2.78
Hfm1D3Z4R1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Hfm1D3Z4R1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC32.39■■■□□ 2.78
Hfm1D3Z4R1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC32.39■■■□□ 2.78
Hfm1D3Z4R1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Hfm1D3Z4R1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC32.38■■■□□ 2.77
Hfm1D3Z4R1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Hfm1D3Z4R1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC32.37■■■□□ 2.77
Hfm1D3Z4R1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Hfm1D3Z4R1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Hfm1D3Z4R1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC32.36■■■□□ 2.77
Hfm1D3Z4R1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Hfm1D3Z4R1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
Hfm1D3Z4R1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Hfm1D3Z4R1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
Hfm1D3Z4R1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Hfm1D3Z4R1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Hfm1D3Z4R1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Hfm1D3Z4R1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Hfm1D3Z4R1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Hfm1D3Z4R1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Hfm1D3Z4R1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Hfm1D3Z4R1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Hfm1D3Z4R1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Hfm1D3Z4R1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Hfm1D3Z4R1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Hfm1D3Z4R1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Hfm1D3Z4R1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Hfm1D3Z4R1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Hfm1D3Z4R1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Hfm1D3Z4R1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC32.32■■■□□ 2.76
Hfm1D3Z4R1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Hfm1D3Z4R1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC32.31■■■□□ 2.76
Hfm1D3Z4R1 Etf1-202ENSMUST00000180351 108 ntBASIC32.31■■■□□ 2.76
Hfm1D3Z4R1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC32.31■■■□□ 2.76
Hfm1D3Z4R1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
Hfm1D3Z4R1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Hfm1D3Z4R1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
Hfm1D3Z4R1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Hfm1D3Z4R1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Hfm1D3Z4R1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Hfm1D3Z4R1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Hfm1D3Z4R1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
Hfm1D3Z4R1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
Hfm1D3Z4R1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC32.27■■■□□ 2.76
Hfm1D3Z4R1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC32.27■■■□□ 2.76
Hfm1D3Z4R1 Gm5131-201ENSMUST00000212776 1238 ntBASIC32.27■■■□□ 2.76
Hfm1D3Z4R1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC32.26■■■□□ 2.76
Hfm1D3Z4R1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Hfm1D3Z4R1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
Hfm1D3Z4R1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Hfm1D3Z4R1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Hfm1D3Z4R1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Hfm1D3Z4R1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Hfm1D3Z4R1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
Hfm1D3Z4R1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC32.24■■■□□ 2.75
Hfm1D3Z4R1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
Hfm1D3Z4R1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Hfm1D3Z4R1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Hfm1D3Z4R1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Hfm1D3Z4R1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
Hfm1D3Z4R1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Hfm1D3Z4R1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Hfm1D3Z4R1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Hfm1D3Z4R1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC32.21■■■□□ 2.75
Hfm1D3Z4R1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Hfm1D3Z4R1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Hfm1D3Z4R1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Hfm1D3Z4R1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC32.2■■■□□ 2.74
Hfm1D3Z4R1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Hfm1D3Z4R1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Hfm1D3Z4R1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Hfm1D3Z4R1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Hfm1D3Z4R1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
Hfm1D3Z4R1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Hfm1D3Z4R1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms