Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav12-2A0N8N6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav12-2A0N8N6 Terc-201ENSMUST00000082862 423 ntBASIC19.66■□□□□ 0.74
Trav12-2A0N8N6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav12-2A0N8N6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav12-2A0N8N6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12-2A0N8N6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12-2A0N8N6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.65■□□□□ 0.74
Trav12-2A0N8N6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trav12-2A0N8N6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12-2A0N8N6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.65■□□□□ 0.74
Trav12-2A0N8N6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12-2A0N8N6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12-2A0N8N6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12-2A0N8N6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Trav12-2A0N8N6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav12-2A0N8N6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav12-2A0N8N6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Trav12-2A0N8N6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trav12-2A0N8N6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav12-2A0N8N6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Trav12-2A0N8N6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav12-2A0N8N6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.63■□□□□ 0.73
Trav12-2A0N8N6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav12-2A0N8N6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.62■□□□□ 0.73
Trav12-2A0N8N6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12-2A0N8N6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12-2A0N8N6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12-2A0N8N6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trav12-2A0N8N6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12-2A0N8N6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12-2A0N8N6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trav12-2A0N8N6 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.62■□□□□ 0.73
Trav12-2A0N8N6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav12-2A0N8N6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Trav12-2A0N8N6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav12-2A0N8N6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav12-2A0N8N6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav12-2A0N8N6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trav12-2A0N8N6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav12-2A0N8N6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav12-2A0N8N6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav12-2A0N8N6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav12-2A0N8N6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav12-2A0N8N6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.58■□□□□ 0.72
Trav12-2A0N8N6 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.58■□□□□ 0.72
Trav12-2A0N8N6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trav12-2A0N8N6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Trav12-2A0N8N6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav12-2A0N8N6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav12-2A0N8N6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav12-2A0N8N6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav12-2A0N8N6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trav12-2A0N8N6 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.57■□□□□ 0.72
Trav12-2A0N8N6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav12-2A0N8N6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trav12-2A0N8N6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav12-2A0N8N6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav12-2A0N8N6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav12-2A0N8N6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav12-2A0N8N6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav12-2A0N8N6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav12-2A0N8N6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trav12-2A0N8N6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-2A0N8N6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-2A0N8N6 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.56■□□□□ 0.72
Trav12-2A0N8N6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.56■□□□□ 0.72
Trav12-2A0N8N6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-2A0N8N6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-2A0N8N6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-2A0N8N6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-2A0N8N6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav12-2A0N8N6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav12-2A0N8N6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trav12-2A0N8N6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.55■□□□□ 0.72
Trav12-2A0N8N6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav12-2A0N8N6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav12-2A0N8N6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav12-2A0N8N6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav12-2A0N8N6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav12-2A0N8N6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.54■□□□□ 0.72
Trav12-2A0N8N6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav12-2A0N8N6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav12-2A0N8N6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav12-2A0N8N6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trav12-2A0N8N6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav12-2A0N8N6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav12-2A0N8N6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav12-2A0N8N6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav12-2A0N8N6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav12-2A0N8N6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav12-2A0N8N6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.52■□□□□ 0.72
Trav12-2A0N8N6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav12-2A0N8N6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.52■□□□□ 0.72
Trav12-2A0N8N6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav12-2A0N8N6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav12-2A0N8N6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav12-2A0N8N6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.51■□□□□ 0.71
Trav12-2A0N8N6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav12-2A0N8N6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms